RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 GPR179Q6PRD1 2367 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TNRC18O15417 2968 aaPredicted RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TRBV5-5A0A0J9YX44 114 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PLSCR5A0PG75 271 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 RFPL4AA6NLU0 287 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 RFPL4AL1F8VTS6 287 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 SLC17A2O00624 439 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 GMDSO60547 372 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 CTSVO60911 334 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 KDM4BO94953 1096 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ZFPL1O95159 310 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TXNDC12O95881 172 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 HPXP02790 462 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 AMY2AP04746 511 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 GLAP06280 429 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PET100P0DJ07 73 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TDGF1P13385 188 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TBPP20226 339 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 CCKBRP32239 447 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ACAA2P42765 397 aaKnown RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TPMTP51580 245 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 MECP2P51608 486 aaKnown RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 CLDN12P56749 244 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 FXYD6P3P58550 94 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 GPR85P60893 370 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PPP2CBP62714 309 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PPP2CAP67775 309 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PLAURQ03405 335 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TSC22D1Q15714 1073 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF74Q16587 644 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM244Q5VVB8 128 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 SSX6Q7RTT6 188 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TMPRSS9Q7Z410 1059 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ADGRE4PQ86SQ3 457 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 C19orf47Q8N9M1 422 aaKnown RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PXT1Q8NFP0 134 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 OR2G2Q8NGZ5 317 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM234Q8WY98 164 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 C3orf49Q96BT1 292 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 SLC25A38Q96DW6 304 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PHYHIPLQ96FC7 376 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 Q96M85 177 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 C5orf34Q96MH7 638 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 SLC46A1Q96NT5 459 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PHB2Q99623 299 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 NRTNQ99748 197 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ORAI3Q9BRQ5 295 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 NMNAT2Q9BZQ4 307 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 OR10A5Q9H207 317 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 UCK1Q9HA47 277 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PILRAQ9UKJ1 303 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 HHLA2Q9UM44 414 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ADAM18Q9Y3Q7 739 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 DOCK8Q8NF50 2099 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 RPS10-NUDT3A0A1W2PQS6 291 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PRAMEF26H0Y7S4 382 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 OR2T1O43869 369 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 EIF4E2O60573 245 aaKnown RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 CDC123O75794 336 aaPredicted RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 SPARCP09486 303 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TFPIP10646 304 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ACHEP22303 614 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 DCTDP32321 178 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ADH7P40394 386 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PRKXP51817 358 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 HCCSP53701 268 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PLEKHN1Q494U1 663 aaPredicted RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ACTBL2Q562R1 376 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 NHLRC3Q5JS37 347 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 FAM209BQ5JX69 171 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 UQCC3Q6UW78 93 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 Q6ZTK2 550 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 KANSL1Q7Z3B3 1105 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TMED4Q7Z7H5 227 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 SYT9Q86SS6 491 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF546Q86UE3 836 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 STPG2Q8N412 459 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 BCORP1Q8N888 145 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF511Q8NB15 262 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 STEAP2Q8NFT2 490 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 OR4C16Q8NGL9 310 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 OR9A4Q8NGU2 314 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 OR6K3Q8NGY3 331 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ELP5Q8TE02 316 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 LIPHQ8WWY8 451 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ST8SIA4Q92187 359 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 HSD17B8Q92506 261 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 RNF166Q96A37 237 aaPredicted RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 CTHRC1Q96CG8 243 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TCTN2Q96GX1 697 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 ZNF471Q9BX82 626 aaPredicted RBP3.6□□□□□ -1.83
SCN1A-214ENST00000637038 LAT2Q9GZY6 243 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PIGMQ9H3S5 423 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 TMEM185BQ9H7F4 350 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 HEXA-AS1Q9H8Q6 139 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 PCDHB16Q9NRJ7 776 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 KLK11Q9UBX7 282 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 OPN4Q9UHM6 478 aa3.6□□□□□ -1.83
SCN1A-214ENST00000637038 FBXL4Q9UKA2 621 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms