RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 TNFAIP6P98066 277 aaPredicted RBP5.32□□□□□ -1.56
CUX1-220ENST00000607092 GUCY1A3Q02108 690 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 ANKDD1AQ495B1 522 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 PABPC1L2AQ5JQF8 200 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 LRIF1Q5T3J3 769 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 FAM27BQ5VT28 67 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 LRFN4Q6PJG9 635 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 LINC00114Q6XXX2 140 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 WDR88Q6ZMY6 472 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 NLRC3Q7RTR2 1065 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 LRRC28Q86X40 367 aaPredicted RBP5.32□□□□□ -1.56
CUX1-220ENST00000607092 C1orf87Q8N0U7 546 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 C11orf65Q8NCR3 313 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 NOXO1Q8NFA2 376 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 NFKBIDQ8NI38 313 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 KLF14Q8TD94 323 aaPredicted RBP5.32□□□□□ -1.56
CUX1-220ENST00000607092 C22orf15Q8WYQ4 148 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 MAL2Q969L2 176 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 UBE2FQ969M7 185 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 MCHR2Q969V1 340 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 VPS33AQ96AX1 596 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 TMIGD2Q96BF3 282 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 MARS2Q96GW9 593 aaKnown RBP5.32□□□□□ -1.56
CUX1-220ENST00000607092 MOGAT1Q96PD6 335 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 CCT8L2Q96SF2 557 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 SEPHS2Q99611 448 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 MCHR1Q99705 422 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 NDEL1Q9GZM8 345 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 PAIP1Q9H074 479 aaKnown RBP5.32□□□□□ -1.56
CUX1-220ENST00000607092 MMP27Q9H306 513 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 OR51B6Q9H340 312 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 RABEP2Q9H5N1 569 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 WDR55Q9H6Y2 383 aaPredicted RBP5.32□□□□□ -1.56
CUX1-220ENST00000607092 SLC6A13Q9NSD5 602 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 TMEM106BQ9NUM4 274 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 TBCCD1Q9NVR7 557 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 NKIRAS1Q9NYS0 192 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 TAS2R5Q9NYW4 299 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 ZNF69Q9UC07 566 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.32□□□□□ -1.56
CUX1-220ENST00000607092 MIOXQ9UGB7 285 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 IL19Q9UHD0 177 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 LEF1Q9UJU2 399 aaPredicted RBP5.32□□□□□ -1.56
CUX1-220ENST00000607092 PPP1R3CQ9UQK1 317 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 INSIG2Q9Y5U4 225 aa5.32□□□□□ -1.56
CUX1-220ENST00000607092 BLOC1S5-TXNDC5H3BN57 136 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 NDUFAB1O14561 156 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 SNNO75324 88 aaPredicted RBP5.31□□□□□ -1.56
CUX1-220ENST00000607092 NDUFA7O95182 113 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 CH25HO95992 272 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 IGHV2-70P01814 119 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 C1QCP02747 245 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 LIPFP07098 398 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 CST2P09228 141 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 PATE4P0C8F1 98 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 COX5BP10606 129 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 THRBP10828 461 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 CCL2P13500 99 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 ACADSP16219 412 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 GPX2P18283 190 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 CD247P20963 164 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 RGS6P49758 472 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 PPP1CBP62140 327 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 BTG1P62324 171 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 GLO1Q04760 184 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 CDK5R2Q13319 367 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 SLC9A3R2Q15599 337 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 KCNJ8Q15842 424 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 THEM4Q5T1C6 240 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 GPR157Q5UAW9 335 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 LEG1Q6P5S2 330 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 SPATC1Q76KD6 591 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 CPLX4Q7Z7G2 160 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 PARP8Q8N3A8 854 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 LRRC18Q8N456 261 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 PAQR4Q8N4S7 273 aaPredicted RBP5.31□□□□□ -1.56
CUX1-220ENST00000607092 ZNF283Q8N7M2 679 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 OR5L1Q8NGL2 311 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 ABHD4Q8TB40 342 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 SLC25A40Q8TBP6 338 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 SLC26A7Q8TE54 656 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 ADAMTS16Q8TE57 1224 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 UPRTQ96BW1 309 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 FAM71F1Q96KD3 344 aaPredicted RBP5.31□□□□□ -1.56
CUX1-220ENST00000607092 POM121L2Q96KW2 1035 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 TSPAN32Q96QS1 320 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 ALG12Q9BV10 488 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 RSPO3Q9BXY4 272 aaPredicted RBP5.31□□□□□ -1.56
CUX1-220ENST00000607092 MRPL13Q9BYD1 178 aaKnown RBP5.31□□□□□ -1.56
CUX1-220ENST00000607092 OR2J1Q9GZK6 312 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 C20orf27Q9GZN8 174 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 PCDHAC1Q9H158 963 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 TRIM36Q9NQ86 728 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 INIPQ9NRY2 104 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 KLHL21Q9UJP4 597 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 POMT1Q9Y6A1 747 aa5.31□□□□□ -1.56
CUX1-220ENST00000607092 PRKDCP78527 4128 aaKnown RBP5.3□□□□□ -1.56
CUX1-220ENST00000607092 KIR2DS1A0A191URI9 304 aa5.3□□□□□ -1.56
CUX1-220ENST00000607092 TMEM120BA0PK00 339 aa5.3□□□□□ -1.56
CUX1-220ENST00000607092 CLPSL1A2RUU4 121 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms