RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ALG10Q5BKT4 473 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 INTS11Q5TA45 600 aaKnown RBP8.99□□□□□ -0.97
USE1-203ENST00000593597 CGB2Q6NT52 195 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 MICU2Q8IYU8 434 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 BCL6BQ8N143 479 aaPredicted RBP8.99□□□□□ -0.97
USE1-203ENST00000593597 ABHD4Q8TB40 342 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 SLC26A7Q8TE54 656 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 RAB1CQ92928 201 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 MAGEB18Q96M61 343 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 DUX5Q96PT3 197 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 SUCNR1Q9BXA5 334 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 C7orf69Q9H7B7 122 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 ZNF69Q9UC07 566 aa8.99□□□□□ -0.97
USE1-203ENST00000593597 ISPDA4D126 451 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 F5H0A9 414 aaPredicted RBP8.98□□□□□ -0.97
USE1-203ENST00000593597 J3KTA2 159 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 IFI30P13284 250 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 GCH1P30793 250 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 LIMS1P48059 325 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 CYBRD1Q53TN4 286 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 TSEN54Q7Z6J9 526 aaKnown RBP8.98□□□□□ -0.97
USE1-203ENST00000593597 ZNF283Q8N7M2 679 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 SIGLECL1Q8N7X8 197 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 C3orf56Q8N813 242 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 OR8J3Q8NGG0 315 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 OR13C2Q8NGS9 318 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 NANPQ8TBE9 248 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 C10orf82Q8WW14 230 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 RASSF5Q8WWW0 418 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 BPIFA2Q96DR5 249 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 ALG12Q9BV10 488 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 POLR2J2Q9GZM3 115 aaKnown RBP8.98□□□□□ -0.97
USE1-203ENST00000593597 POLR2J3Q9H1A7 115 aaKnown RBP8.98□□□□□ -0.97
USE1-203ENST00000593597 LRMDAQ9H2I8 198 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 EMC7Q9NPA0 242 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 POLE4Q9NR33 117 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 INTS9Q9NV88 658 aaKnown RBP8.98□□□□□ -0.97
USE1-203ENST00000593597 UBAP1Q9NZ09 502 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 RHCGQ9UBD6 479 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 POLR3KQ9Y2Y1 108 aaPredicted RBP8.98□□□□□ -0.97
USE1-203ENST00000593597 MED31Q9Y3C7 131 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 PCDHGB1Q9Y5G3 927 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 NPTNQ9Y639 398 aa8.98□□□□□ -0.97
USE1-203ENST00000593597 A0A0G2JND7 137 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 A0A1W2PPL8 197 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 DNAJC9-AS1A6NH13 148 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 FAM220BPB1ANY3 271 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 H3BSA7 217 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 CDC42EP2O14613 210 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 TMPRSS2O15393 492 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 MT-ND5P03915 603 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 HKR1P10072 659 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 THRBP10828 461 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 ZNF12P17014 697 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 KDELR2P33947 212 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 YAP1P46937 504 aaKnown RBP8.97□□□□□ -0.97
USE1-203ENST00000593597 CTXN1P60606 82 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 TNFAIP6P98066 277 aaPredicted RBP8.97□□□□□ -0.97
USE1-203ENST00000593597 PAX2Q02962 417 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 DBPQ10586 325 aaPredicted RBP8.97□□□□□ -0.97
USE1-203ENST00000593597 SF3A3Q12874 501 aaKnown RBP eCLIP8.97□□□□□ -0.97
USE1-203ENST00000593597 SCGB2A2Q13296 93 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 ZMYND11Q15326 602 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 MOGQ16653 247 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 LRRC23Q53EV4 343 aaPredicted RBP8.97□□□□□ -0.97
USE1-203ENST00000593597 MESTQ5EB52 335 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 MTX3Q5HYI7 312 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 DOK3Q7L591 496 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 FAM122BQ7Z309 247 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 HDDC2Q7Z4H3 204 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 VTCN1Q7Z7D3 282 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 NRMQ8IXM6 262 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 BPIFB2Q8N4F0 458 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 OR51A7Q8NH64 312 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 DYDC1Q8WWB3 177 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 SLC7A6Q92536 515 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 DACT3Q96B18 629 aaPredicted RBP8.97□□□□□ -0.97
USE1-203ENST00000593597 ZMYND19Q96E35 227 aaPredicted RBP8.97□□□□□ -0.97
USE1-203ENST00000593597 TIMD4Q96H15 378 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 C4orf45Q96LM5 186 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 PRRC1Q96M27 445 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 DCLRE1CQ96SD1 692 aaKnown RBP8.97□□□□□ -0.97
USE1-203ENST00000593597 TMEM120AQ9BXJ8 343 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 TMEM106BQ9NUM4 274 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 EGFL7Q9UHF1 273 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 PURGQ9UJV8 347 aaKnown RBP8.97□□□□□ -0.97
USE1-203ENST00000593597 BAG5Q9UL15 447 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 STARD10Q9Y365 291 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 ADAM18Q9Y3Q7 739 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
USE1-203ENST00000593597 PPIAL4EA0A075B759 164 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 A0A087WUU8 490 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 PPIAL4CA0A0B4J2A2 164 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 PLSCR5A0PG75 271 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 A8MXK9 166 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 PPIAL4DF5H284 164 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 MRASO14807 208 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 SBK2P0C263 348 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 PPIAL4FP0DN26 164 aa8.96□□□□□ -0.98
USE1-203ENST00000593597 KITLGP21583 273 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms