RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 CUX2O14529 1486 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 A0A0G2JMP0 313 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 A0A0X1KG70 313 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 A0A1B0GW15 77 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 A0A1W2PQL4 384 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 A0A1W2PRG6 482 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 FAM92AA1XBS5 289 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 VPS37CA5D8V6 355 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 LEUTXA8MZ59 168 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 NPIPA7E9PJI5 369 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 LOC110117498-PIK3R3F6TDL0 507 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 M0QYV0 167 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 M0QZK8 103 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ABCD4O14678 606 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 SGCEO43556 437 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 RNF13O43567 381 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 PRKYO43930 277 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 NME2P1O60361 137 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 OR10H3O60404 316 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 RHOBTB1O94844 696 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 IFNA4P05014 189 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ANXA4P09525 319 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 NPIPA8P0DM63 369 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 B4GALT1P15291 398 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ZNF44P15621 663 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 CD36P16671 472 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 PSMC3P17980 439 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 OGNP20774 298 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 MSR1P21757 451 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 GABRR1P24046 479 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 DCKP27707 260 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 AKT2P31751 481 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 HNRNPH3P31942 346 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 UGT2B10P36537 528 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 P2RY2P41231 377 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 NAMPTP43490 491 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 YAP1P46937 504 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 KCNJ3P48549 501 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 CDK9P50750 372 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 FGF8P55075 233 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 OR2B6P58173 313 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 IL9RQ01113 521 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 TNFRSF9Q07011 255 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 PDZK1IP1Q13113 114 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 GANABQ14697 944 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ARL6IP1Q15041 203 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 DEFB115Q30KQ5 88 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 KLHL12Q53G59 568 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 OR2B11Q5JQS5 317 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 LGSNQ5TDP6 509 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 HACD4Q5VWC8 232 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 PLCXD3Q63HM9 321 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ANKRD26P1Q6NSI1 321 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ACSM5Q6NUN0 579 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 CD300LGQ6UXG3 332 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ASRGL1Q7L266 308 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 PID1Q7Z2X4 250 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 TMEM17Q86X19 198 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 TGIF2LXQ8IUE1 241 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 RBM45Q8IUH3 476 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 UBE2J2Q8N2K1 259 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 MREGQ8N565 214 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 FADS6Q8N9I5 356 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 CCDC71LQ8N9Z2 235 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 CCNYQ8ND76 341 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 OR56B1Q8NGI3 324 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 OR4D6Q8NGJ1 314 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 RNASE11Q8TAA1 199 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 AENQ8WTP8 325 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 DNAJC9Q8WXX5 260 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ARNTL2Q8WYA1 636 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 AP3S1Q92572 193 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 GLYATL1Q969I3 302 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 FAM46BQ96A09 425 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 S100PBPQ96BU1 408 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 HAVCR1Q96D42 359 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ECHDC3Q96DC8 303 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 PRAP1Q96NZ9 151 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 KCNA7Q96RP8 456 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 NPY6RQ99463 290 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 C7orf50Q9BRJ6 194 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ZNF2Q9BSG1 426 aaPredicted RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 TSSK1BQ9BXA7 367 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ROGDIQ9GZN7 287 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 PCBD2Q9H0N5 130 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 RAB17Q9H0T7 212 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ALG9Q9H6U8 611 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 SMYD3Q9H7B4 428 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 TMEM185BQ9H7F4 350 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 CD209Q9NNX6 404 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 EXOSC3Q9NQT5 275 aaKnown RBP2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 MTCH1Q9NZJ7 389 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 ADA2Q9NZK5 511 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 MAT2BQ9NZL9 334 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 GCNT4Q9P109 453 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 MIOXQ9UGB7 285 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 OPN4Q9UHM6 478 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 GNPTGQ9UJJ9 305 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 DNAJC12Q9UKB3 198 aa2.61□□□□□ -1.99
SMCHD1-202ENST00000577300 FBXL3Q9UKT7 428 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms