RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 OR4C45A6NMZ5 311 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 BRINP1O60477 761 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 LMX1BO60663 402 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 SRPX2O60687 465 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 GRK6P43250 576 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 S100A10P60903 97 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 HABP2Q14520 560 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 IRF4Q15306 451 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ITPRIPL2Q3MIP1 535 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 PSRC1Q6PGN9 363 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ABHD13Q7L211 337 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF584Q8IVC4 421 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 METTL27Q8N6F8 245 aaPredicted RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 OR4K17Q8NGC6 315 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 OR2L8Q8NGY9 312 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ZC3H10Q96K80 434 aaKnown RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF285Q96NJ3 590 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 KLHDC3Q9BQ90 382 aa13.14□□□□□ -0.31
SCARF1-209ENST00000576012 DNAJB12Q9NXW2 375 aaKnown RBP13.14□□□□□ -0.31
SCARF1-209ENST00000576012 hCG_1809904A0A1W2PP81 198 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 A0A1W2PPC1 479 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 A0A1W2PR64 198 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 A0A1W2PRV1 198 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 M0R036 132 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 DPTQ07507 201 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 RNASE10Q5GAN6 216 aaKnown RBP13.13□□□□□ -0.31
SCARF1-209ENST00000576012 NCMAPQ5T1S8 102 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 FBXO42Q6P3S6 717 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 SFTPA2Q8IWL1 248 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF417Q8TAU3 575 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 SPACA5Q96QH8 159 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 RHOFQ9HBH0 211 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 KLK13Q9UKR3 277 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 ATXN7L1Q9ULK2 861 aaPredicted RBP13.13□□□□□ -0.31
SCARF1-209ENST00000576012 EIF1AYO14602 144 aaKnown RBP13.13□□□□□ -0.31
SCARF1-209ENST00000576012 MOSPD3O75425 235 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 PMP2P02689 132 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 SFTA3P0C7M3 94 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 RCC1P18754 421 aaPredicted RBP13.13□□□□□ -0.31
SCARF1-209ENST00000576012 EBPQ15125 230 aaKnown RBP13.13□□□□□ -0.31
SCARF1-209ENST00000576012 ALG10Q5BKT4 473 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 ULK3Q6PHR2 472 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 GALNTL5Q7Z4T8 443 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 C12orf76Q8N812 135 aaPredicted RBP13.13□□□□□ -0.31
SCARF1-209ENST00000576012 MFSD9Q8NBP5 474 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 COX14Q96I36 57 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 CMTM3Q96MX0 182 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 SRMSQ9H3Y6 488 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 CERS4Q9HA82 394 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 DEC1Q9P2X7 70 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 GRHPRQ9UBQ7 328 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 B9D1Q9UPM9 204 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 SLC27A6Q9Y2P4 619 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 PLXNA2O75051 1894 aa13.13□□□□□ -0.31
SCARF1-209ENST00000576012 A6NLC8 198 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 PNPP00491 289 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 CTSBP07858 339 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 MECP2P51608 486 aaKnown RBP13.12□□□□□ -0.31
SCARF1-209ENST00000576012 GPR143P51810 404 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 ACTBP60709 375 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 ACTG1P63261 375 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 MPPED2Q15777 294 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 PPP1R3BQ86XI6 285 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 BAP18Q8IXM2 172 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 ZNF615Q8N8J6 731 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 MRPS18BQ9Y676 258 aaKnown RBP13.12□□□□□ -0.31
SCARF1-209ENST00000576012 SLC22A7Q9Y694 548 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 LOC100289279A0A1B0GTE1 492 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 C1orf196B1AJZ1 125 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 C9JQL5 133 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 ARG1P05089 322 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 PTAFRP25105 342 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 KIR3DL2P43630 455 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 ENPP2Q13822 863 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 DHRS7BQ6IAN0 325 aaPredicted RBP13.12□□□□□ -0.31
SCARF1-209ENST00000576012 CAMKVQ8NCB2 501 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 TMIEQ8NEW7 156 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 PATE1Q8WXA2 126 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 TRIM2Q9C040 744 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 MRPS33Q9Y291 106 aaKnown RBP13.12□□□□□ -0.31
SCARF1-209ENST00000576012 C1QTNF3-AMACRE9PGA6 284 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 MED6O75586 246 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 CEBPBP17676 345 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 FAM76BQ5HYJ3 339 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 PAPD4Q6PIY7 484 aaKnown RBP13.12□□□□□ -0.31
SCARF1-209ENST00000576012 DPY19L2P2Q6ZN68 376 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 KDM8Q8N371 416 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 MARCH1Q8TCQ1 289 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 GPX8Q8TED1 209 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 C15orf40Q8WUR7 153 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 GAL3ST3Q96A11 431 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 SLC41A2Q96JW4 573 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 TBC1D29Q9UFV1 150 aa13.12□□□□□ -0.31
SCARF1-209ENST00000576012 LRP3O75074 770 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 RDH16O75452 317 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 OR6A2O95222 327 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 CISD3P0C7P0 127 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 TPT1P13693 172 aaKnown RBP13.11□□□□□ -0.31
SCARF1-209ENST00000576012 HRH1P35367 487 aa13.11□□□□□ -0.31
SCARF1-209ENST00000576012 ACER2Q5QJU3 275 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms