RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 TGFBR2P37173 567 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 MPV17P39210 176 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 ACAA2P42765 397 aaKnown RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 RANBP1P43487 201 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 IER3P46695 156 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 SLC1A6P48664 564 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 PITPNBP48739 271 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 ABCE1P61221 599 aaKnown RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 CTAG1AP78358 180 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 PUDPQ08623 228 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 MAD2L1Q13257 205 aaPredicted RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 DCTN2Q13561 401 aaKnown RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 PCLAFQ15004 111 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 SMU1Q2TAY7 513 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 MTX3Q5HYI7 312 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 DEFB121Q5J5C9 76 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 THEM4Q5T1C6 240 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 RNF220Q5VTB9 566 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 IL23RQ5VWK5 629 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 FOXB2Q5VYV0 432 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 FAM91A1Q658Y4 838 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 OR4F3Q6IEY1 312 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 ZNF774Q6NX45 483 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 SLC27A4Q6P1M0 643 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 ZCCHC23Q6ZST2 131 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 PTOV1Q86YD1 416 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 SKA3Q8IX90 412 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 KRTCAP2Q8N6L1 136 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 TRIML2Q8N7C3 387 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 ANKFN1Q8N957 763 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 SMYD1Q8NB12 490 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 RBM15BQ8NDT2 890 aaKnown RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 SLC25A40Q8TBP6 338 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 KLF14Q8TD94 323 aaPredicted RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 SLC35A5Q9BS91 424 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 KCNN2Q9H2S1 579 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 TOR3AQ9H497 397 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 MTHFD2LQ9H903 347 aaPredicted RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 MSL2Q9HCI7 577 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 FGFR1OP2Q9NVK5 253 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 TMEM38BQ9NVV0 291 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 RLIMQ9NVW2 624 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 CLN8Q9UBY8 286 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 IL19Q9UHD0 177 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 VPREB3Q9UKI3 123 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 CAB39Q9Y376 341 aaPredicted RBP4.91□□□□□ -1.62
SMG6-219ENST00000575663 DNAJC15Q9Y5T4 150 aa4.91□□□□□ -1.62
SMG6-219ENST00000575663 A0A087WUJ7 227 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 TRPC5OSA6NMA1 111 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 TMEM178BH3BS89 294 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 HMGN4O00479 90 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 PHYHO14832 338 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 HDAC3O15379 428 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 SERPINI2O75830 405 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 TOX4O94842 621 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 CPSF4O95639 269 aaKnown RBP4.9□□□□□ -1.63
SMG6-219ENST00000575663 PPP1R3DO95685 299 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 LIPFP07098 398 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 FBP1P09467 338 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 G6PDP11413 515 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 HLA-DOBP13765 273 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 BGNP21810 368 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 CBLP22681 906 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 AHCYP23526 432 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 STOMP27105 288 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 ATP6V1E1P36543 226 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 CFHR2P36980 270 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 RASSF2P50749 326 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 RPL14P50914 215 aaKnown RBP4.9□□□□□ -1.63
SMG6-219ENST00000575663 MMP16P51512 607 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 ZNF84P51523 738 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 ARHGDIAP52565 204 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 CRISP3P54108 245 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 EGR4Q05215 589 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 SYPL1Q16563 259 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 PDCD4Q53EL6 469 aaKnown RBP4.9□□□□□ -1.63
SMG6-219ENST00000575663 ANXA8L1Q5VT79 327 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 METTL11BQ5VVY1 283 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 CFAP161Q6P656 301 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 ZNF836Q6ZNA1 936 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 ANKRD46Q86W74 232 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 VRK2Q86Y07 508 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 C10orf107Q8IVU9 208 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 RIMKLAQ8IXN7 391 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 ZNF101Q8IZC7 436 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 C1orf87Q8N0U7 546 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 OR8H2Q8N162 312 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 FITM2Q8N6M3 262 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 C11orf44Q8N8P7 122 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 SCAIQ8N9R8 606 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 OR2Z1Q8NG97 314 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 OR4F17Q8NGA8 305 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 OR4K5Q8NGD3 323 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 OR52P1PQ8NH57 321 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 FGFBP3Q8TAT2 258 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 ABHD4Q8TB40 342 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 TAAR8Q969N4 342 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 ZNF566Q969W8 418 aa4.9□□□□□ -1.63
SMG6-219ENST00000575663 DACT3Q96B18 629 aaPredicted RBP4.9□□□□□ -1.63
SMG6-219ENST00000575663 OR4F4Q96R69 305 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms