RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 MSMPQ1L6U9 139 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 SDR9C7Q8NEX9 313 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 GIPC3Q8TF64 312 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 MRPL24Q96A35 216 aaKnown RBP17.81■□□□□ 0.44
CHMP6-204ENST00000572778 COX4I2Q96KJ9 171 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 SORCS2Q96PQ0 1159 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 SMR3AQ99954 134 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 SYT3Q9BQG1 590 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 MRPL37Q9BZE1 423 aaKnown RBP17.81■□□□□ 0.44
CHMP6-204ENST00000572778 PLA2G12AQ9BZM1 189 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 DYNLRB1Q9NP97 96 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 TBC1D23Q9NUY8 699 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 IL20Q9NYY1 176 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 FBXO9Q9UK97 447 aaPredicted RBP17.81■□□□□ 0.44
CHMP6-204ENST00000572778 ZNF469Q96JG9 3925 aaPredicted RBP17.81■□□□□ 0.44
CHMP6-204ENST00000572778 PLCE1Q9P212 2302 aa17.81■□□□□ 0.44
CHMP6-204ENST00000572778 TEP1Q99973 2627 aaKnown RBP17.8■□□□□ 0.44
CHMP6-204ENST00000572778 C5orf49A4QMS7 147 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 LY6HO94772 140 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 MPZL1O95297 269 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 LCKP06239 509 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 IGFBP1P08833 259 aaPredicted RBP17.8■□□□□ 0.44
CHMP6-204ENST00000572778 GSTM3P21266 225 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 CBX1P83916 185 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 GK3PQ14409 553 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 RGS7BPQ6MZT1 257 aaPredicted RBP17.8■□□□□ 0.44
CHMP6-204ENST00000572778 ZNF774Q6NX45 483 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 CLEC2AQ6UVW9 174 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.8■□□□□ 0.44
CHMP6-204ENST00000572778 SYT9Q86SS6 491 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 ICA1LQ8NDH6 482 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 OR52E2Q8NGJ4 325 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 POM121L2Q96KW2 1035 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 SNX18Q96RF0 628 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 RHNO1Q9BSD3 238 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 TSSK6Q9BXA6 273 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 DGCR6LQ9BY27 220 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 RPRD1BQ9NQG5 326 aaKnown RBP17.8■□□□□ 0.44
CHMP6-204ENST00000572778 DUSP13Q9UII6 198 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 B9D1Q9UPM9 204 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 FKBP7Q9Y680 259 aa17.8■□□□□ 0.44
CHMP6-204ENST00000572778 LOC100509620A0A075B734 347 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 RNF223E7ERA6 249 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 DCTN6O00399 190 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 FKBP6O75344 327 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 E2F6O75461 281 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 SOX14O95416 240 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 GPANK1O95872 356 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 F12P00748 615 aaPredicted RBP17.79■□□□□ 0.44
CHMP6-204ENST00000572778 ADRA2AP08913 450 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 RAD52P43351 418 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 PPOXP50336 477 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 UCP2P55851 309 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHMP6-204ENST00000572778 SCRN3Q0VDG4 424 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 DBPQ10586 325 aaPredicted RBP17.79■□□□□ 0.44
CHMP6-204ENST00000572778 BIVMQ86UB2 503 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 LRP11Q86VZ4 500 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 ZNF525Q8N782 197 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 OR8D4Q8NGM9 314 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 C11orf40Q8WZ69 217 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 FEVQ99581 238 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 NIPSNAP1Q9BPW8 284 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 WACQ9BTA9 647 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 RAB1BQ9H0U4 201 aa17.79■□□□□ 0.44
CHMP6-204ENST00000572778 EIF3KQ9UBQ5 218 aaKnown RBP17.79■□□□□ 0.44
CHMP6-204ENST00000572778 IGLV1-36A0A0B4J1U3 117 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 OR6C68A6NDL8 312 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 BHLHE40O14503 412 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 PCSK6P29122 969 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 EVX1P49640 407 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 DSCR9P59020 149 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 ERVS71-1P61550 626 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 LSM6P62312 80 aaKnown RBP17.78■□□□□ 0.44
CHMP6-204ENST00000572778 DNM1P46Q6ZS02 220 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 TMEM179BQ7Z7N9 219 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 OR6V1Q8N148 313 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 ZCCHC24Q8N2G6 241 aaKnown RBP17.78■□□□□ 0.44
CHMP6-204ENST00000572778 REG4Q9BYZ8 158 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 BCL2L14Q9BZR8 327 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 MMADHCQ9H3L0 296 aaPredicted RBP17.78■□□□□ 0.44
CHMP6-204ENST00000572778 FN3KQ9H479 309 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 PDP1Q9P0J1 537 aaPredicted RBP17.78■□□□□ 0.44
CHMP6-204ENST00000572778 ASH2LQ9UBL3 628 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 POLR1DQ9Y2S0 133 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 MED13LQ71F56 2210 aa17.78■□□□□ 0.44
CHMP6-204ENST00000572778 FAM171A2A8MVW0 826 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 DOK2O60496 412 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 ERCC1P07992 297 aaPredicted RBP17.77■□□□□ 0.44
CHMP6-204ENST00000572778 ALDH3B1P43353 468 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 COX10Q12887 443 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 AQP6Q13520 282 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 MEP1BQ16820 701 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 CLEC9AQ6UXN8 241 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 CYB561A3Q8NBI2 242 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 MAPK1IP1LQ8NDC0 245 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 PAPD5Q8NDF8 572 aaKnown RBP17.77■□□□□ 0.44
CHMP6-204ENST00000572778 NPEPL1Q8NDH3 523 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 OR1J1Q8NGS3 322 aa17.77■□□□□ 0.44
CHMP6-204ENST00000572778 SLCO4A1Q96BD0 722 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms