RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 SNRPD1P62314 119 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CDK6Q00534 326 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 BDH1Q02338 343 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TPBGQ13641 420 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 GNA13Q14344 377 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 PTGES3Q15185 160 aaKnown RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TGIF1Q15583 401 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CHRNA6Q15825 494 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 EXOC3L2Q2M3D2 409 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 C18orf21Q32NC0 220 aaPredicted RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TMEM52BQ4KMG9 183 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 PRAMEF8Q5VWM4 474 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 PRAMEF7Q5VXH5 474 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 HIST2H2AA3Q6FI13 130 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 PLET1Q6UQ28 207 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FOXL2NBQ6ZUU3 175 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 C17orf82Q86X59 251 aaPredicted RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CDK20Q8IZL9 346 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SLC22A18ASQ8N1D0 253 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 BMPERQ8N8U9 685 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 CLHC1Q8NHS4 586 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ENKURQ8TC29 256 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 LKAAEAR1Q8TD35 194 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ROBO4Q8WZ75 1007 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TM9SF4Q92544 642 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ECHDC3Q96DC8 303 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 SCRN2Q96FV2 425 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 RNF170Q96K19 258 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 HYLS1Q96M11 299 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 KCTD7Q96MP8 289 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FOPNLQ96NB1 174 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 IP6K3Q96PC2 410 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TMEM246Q9BRR3 403 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 LRRC61Q9BV99 259 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 GSDMCQ9BYG8 508 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FOLH1BQ9HBA9 442 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 FGF20Q9NP95 211 aaPredicted RBP3.67□□□□□ -1.82
LINC00561-201ENST00000565815 ACER3Q9NUN7 267 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 B3GNT2Q9NY97 397 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 GPR83Q9NYM4 423 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 TAS2R7Q9NYW3 318 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 AHSPQ9NZD4 102 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 EMC3Q9P0I2 261 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 GON4LQ3T8J9 2241 aa3.67□□□□□ -1.82
LINC00561-201ENST00000565815 A0A1W2PRB8 838 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ANKRD61A6NGH8 418 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 KPNA3O00505 521 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 DVL1O14640 695 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 POLR1CO15160 346 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 TPST2O60704 377 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 GPX5O75715 221 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 CPSF4O95639 269 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 CLDN1O95832 211 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 GBAP04062 536 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 SNRNP70P08621 437 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ANXA4P09525 319 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ADRB3P13945 408 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ATP1B2P14415 290 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 IFNGR2P38484 337 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 CRYBB2P43320 205 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 DVL1P1P54792 670 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 GAS1P54826 345 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 RPS24P62847 133 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 MAT1AQ00266 395 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 RAB40BQ12829 278 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 HNRNPA0Q13151 305 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 MAB21L1Q13394 359 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 TRAM1Q15629 374 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 SSX1Q16384 188 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 TRIQKQ629K1 86 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF770Q6IQ21 691 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 REEP3Q6NUK4 255 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 MED27Q6P2C8 311 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 NRARPQ7Z6K4 114 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 THOC6Q86W42 341 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ANKRD46Q86W74 232 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 SNX29P2Q8IUI4 249 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 OR8H3Q8N146 312 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 C10orf111Q8N326 155 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 POC1AQ8NBT0 407 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ST6GALNAC3Q8NDV1 305 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 C19orf18Q8NEA5 215 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 GPR151Q8TDV0 419 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 CXorf40AQ8TE69 158 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 DNAJA4Q8WW22 397 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 NSMAFQ92636 917 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 MR1Q95460 341 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 CREB3L1Q96BA8 519 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 C14orf79Q96F83 325 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 VPS35Q96QK1 796 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF607Q96SK3 696 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 HBEGFQ99075 208 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 SOSTQ9BQB4 213 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ANKRD19PQ9H560 264 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF71Q9NQZ8 489 aaPredicted RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 MED17Q9NVC6 651 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 RBFOX1Q9NWB1 397 aaKnown RBP3.66□□□□□ -1.82
LINC00561-201ENST00000565815 ACAD8Q9UKU7 415 aa3.66□□□□□ -1.82
LINC00561-201ENST00000565815 PRSS21Q9Y6M0 314 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms