RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	TMEM19	Q96HH6	336 aa		3.91	□□□□□ -1.78
MACF1-231	ENST00000564288	LMF1	Q96S06	567 aa		3.91	□□□□□ -1.78
MACF1-231	ENST00000564288	PATZ1	Q9HBE1	687 aa	Known RBP	3.91	□□□□□ -1.78
MACF1-231	ENST00000564288	STAG3L2	P0CL84	134 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	KIAA0040	Q15053	153 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	SLC26A10	Q8NG04	563 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	HOXB13	Q92826	284 aa	Predicted RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	NUDT9	Q9BW91	350 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	GPR87	Q9BY21	358 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	TNFSF10	P50591	281 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	PPIA	P62937	165 aa	Known RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MSMO1	Q15800	293 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	SPNS3	Q6ZMD2	512 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	CLEC20A	Q6ZU45	233 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MELTF	P08582	738 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MYOG	P15173	224 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ZNF136	P52737	540 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	RPS20	P60866	119 aa	Known RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	TCFL5	Q9UL49	500 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	DUXB	A0A1W2PPF3	345 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	FNDC3B	Q53EP0	1204 aa	Known RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	YOD1	Q5VVQ6	348 aa	Predicted RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	PTOV1	Q86YD1	416 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	VAMP8	Q9BV40	100 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ELOVL3	Q9HB03	270 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	POLR1D	Q9Y2S0	133 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	C9orf170	A2RU37	121 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	RCC1	P18754	421 aa	Predicted RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MC1R	Q01726	317 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	EGR3	Q06889	387 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ZNF836	Q6ZNA1	936 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	SLC24A5	Q71RS6	500 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	CFAP52	Q8N1V2	620 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	OR6K2	Q8NGY2	324 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	TXNDC17	Q9BRA2	123 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	EGLN1	Q9GZT9	426 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	C1orf198	Q9H425	327 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	CENPM	Q9NSP4	180 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	TNFSF18	Q9UNG2	199 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	GPR55	Q9Y2T6	319 aa	Predicted RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	YBX2	Q9Y2T7	364 aa	Known RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ZNF337	Q9Y3M9	751 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ALPK2	Q86TB3	2170 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	PRICKLE3	O43900	615 aa	Predicted RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	LCN10	Q6JVE6	187 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	IL22RA1	Q8N6P7	574 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	OR51T1	Q8NGJ9	327 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	OR1S1	Q8NH92	325 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	SEMA6C	Q9H3T2	930 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MSRA	Q9UJ68	235 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	DUSP11	O75319	330 aa	Known RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	HSD11B1	P28845	292 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ANKRD34A	Q69YU3	496 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	EXD3	Q8N9H8	876 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ABHD14B	Q96IU4	210 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	CHST8	Q9H2A9	424 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	SPTB	P11277	2137 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	FAM183A	A6NL82	134 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ZNF727	A8MUV8	499 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ST6GAL1	P15907	406 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ASCL1	P50553	236 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	UBE2G2	P60604	165 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	ZNF791	Q3KP31	576 aa	Predicted RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	CAPNS2	Q96L46	248 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	UQCR10	Q9UDW1	63 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	FOXJ3	Q9UPW0	622 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	SVIL	O95425	2214 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MEX3A	A1L020	520 aa	Known RBP	3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	GPR37	O15354	613 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	TCF21	O43680	179 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	WDR1	O75083	606 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MAS1	P04201	325 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MLC1	Q15049	377 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	PMCHL1	Q16048	86 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	RNF44	Q7L0R7	432 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	OR13C9	Q8NGT0	318 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	MS4A6E	Q96DS6	147 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	TRIB1	Q96RU8	372 aa		3.9	□□□□□ -1.78
MACF1-231	ENST00000564288	EIF2B1	Q14232	305 aa	Known RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	COX18	Q8N8Q8	333 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	TNFRSF13C	Q96RJ3	184 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	PHPT1	Q9NRX4	125 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	KLHL13	Q9P2N7	655 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	NOTCH3	Q9UM47	2321 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	NSG1	A0A0A6YYJ2	146 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	IQCF5	A8MTL0	148 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	LGALS2	P05162	132 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ACAA1	P09110	424 aa	Predicted RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	IL21R	Q9HBE5	538 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	CNOT4	O95628	575 aa	Known RBP	3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	PDE7A	Q13946	482 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	TMEM183B	Q1AE95	376 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	OR52N4	Q8NGI2	321 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	PLEKHM1	Q9Y4G2	1056 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	MMP24	Q9Y5R2	645 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	AQP7	O14520	342 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ATF1	P18846	271 aa		3.9	□□□□□ -1.79
MACF1-231	ENST00000564288	ZNF385C	Q66K41	422 aa	Predicted RBP	3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms