RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 STX7O15400 261 aaKnown RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 GMFGO60234 142 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 ZNF354AO60765 605 aaPredicted RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 ZNF253O75346 499 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 FTH1P02794 183 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 HLA-DQB2P05538 268 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 UMPSP11172 480 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 LAMP1P11279 417 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 KLK2P20151 261 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 ATP6V1C1P21283 382 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 HSD17B2P37059 387 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 SLC1A1P43005 524 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 POU3F4P49335 361 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 SLC25A1P53007 311 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 PPP1CAP62136 330 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 SLC25A11Q02978 314 aaKnown RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 RGS1Q08116 209 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 FAM53BQ14153 422 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 DPYSL3Q14195 570 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 ITIH4Q14624 930 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 ATXN7L3Q14CW9 347 aaPredicted RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 PDK4Q16654 411 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 SLC25A35Q3KQZ1 300 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 ZNF658BQ4V348 819 aaPredicted RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 FAM74A3Q4VXF1 159 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 TCTEX1D4Q5JR98 221 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 GPRC6AQ5T6X5 926 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 NCR3LG1Q68D85 454 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 NCBP2-AS2Q69YL0 99 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 H3F3CQ6NXT2 135 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 TTC23LQ6PF05 361 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 TMEM205Q6UW68 189 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 CERS6Q6ZMG9 384 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 LANCL3Q6ZV70 420 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 SNX20Q7Z614 316 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 ARL6IP6Q8N6S5 226 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 OR5K2Q8NHB8 316 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 M1APQ8TC57 530 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 PNPT1Q8TCS8 783 aaKnown RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 PSMF1Q92530 271 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 TFGQ92734 400 aaPredicted RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 TMEM80Q96HE8 168 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 CNDP1Q96KN2 507 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 FOXN4Q96NZ1 517 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 RNF157Q96PX1 679 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 COPS8Q99627 209 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 OR52A5Q9H2C5 316 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 KCNJ16Q9NPI9 418 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 C6orf203Q9P0P8 240 aaPredicted RBP2.85□□□□□ -1.95
HERC1-215ENST00000561436 ABCD2Q9UBJ2 740 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 SLC2A6Q9UGQ3 507 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 WDR45Q9Y484 360 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 FBN2P35556 2912 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 CITO14578 2027 aa2.85□□□□□ -1.95
HERC1-215ENST00000561436 IGHV1-45A0A0A0MS14 117 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 OR6C65A6NJZ3 312 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 CCT8L1PA6NM43 557 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 PPIAL4DF5H284 164 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 KLRC4-KLRK1H3BQV0 150 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 SAP18O00422 153 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 SLC17A2O00624 439 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 BCKDKO14874 412 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 MFSD11O43934 449 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 UGT1A9O60656 530 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 MTX2O75431 263 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 SRP72O76094 671 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 PROSCO94903 275 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 SLC2A10O95528 541 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 CD55P08174 381 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 UGT2B7P16662 529 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 CHI3L1P36222 383 aaPredicted RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 MAGEA5P43359 124 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 OR1D4P47884 311 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 ALDH3B2P48448 385 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 EMP2P54851 167 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 DSCR10P59022 87 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 LMO4P61968 165 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 RPL32P62910 135 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 TFDP2Q14188 446 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 IHHQ14623 411 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 MESDQ14696 234 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 NDUFA9Q16795 377 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 LINC01620Q4KN68 170 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 SLC25A30Q5SVS4 291 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 ATAD3BQ5T9A4 648 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 SLC25A24Q6NUK1 477 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 APTXQ7Z2E3 356 aaKnown RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 GLT6D1Q7Z4J2 308 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 DOLPP1Q86YN1 238 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 LRRC75A-AS1Q8N1F1 130 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 MTURNQ8N3F0 131 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 DNAAF3Q8N9W5 541 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 CATSPER1Q8NEC5 780 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 OR2L8Q8NGY9 312 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 FAM57AQ8TBR7 257 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 MCOLN3Q8TDD5 553 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 SPRYD4Q8WW59 207 aaPredicted RBP2.84□□□□□ -1.95
HERC1-215ENST00000561436 PEX13Q92968 403 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 DTNBP1Q96EV8 351 aa2.84□□□□□ -1.95
HERC1-215ENST00000561436 IMMP1LQ96LU5 166 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms