RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	CD1B	P29016	333 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	FGF9	P31371	208 aa	Predicted RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	PSMD4	P55036	377 aa	Known RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	GNG2	P59768	71 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	ATP6V0D1	P61421	351 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	BST1	Q10588	318 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	STX3	Q13277	289 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	KYAT1	Q16773	422 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	CTSL3P	Q5NE16	218 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	CCDC137	Q6PK04	289 aa	Known RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	TPGS1	Q6ZTW0	290 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF589	Q86UQ0	364 aa	Predicted RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	CLVS1	Q8IUQ0	354 aa	Predicted RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	MMAA	Q8IVH4	418 aa	Known RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	NRM	Q8IXM6	262 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF680	Q8NEM1	530 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	TTL	Q8NG68	377 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	OR4C5	Q8NGB2	326 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	OR5D13	Q8NGL4	314 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	FANK1	Q8TC84	345 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	TBX15	Q96SF7	602 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC35A5	Q9BS91	424 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	SRXN1	Q9BYN0	137 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	MAGT1	Q9H0U3	335 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	DNTTIP1	Q9H147	329 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	ZNF385D	Q9H6B1	395 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	C11orf49	Q9H6J7	331 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	MRM3	Q9HC36	420 aa	Known RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	INIP	Q9NRY2	104 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	UFSP2	Q9NUQ7	469 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	NUP50	Q9UKX7	468 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	CDH9	Q9ULB4	789 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	PYCARD	Q9ULZ3	195 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	PIGL	Q9Y2B2	252 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	FAM208B	Q5VWN6	2430 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	MAP1B	P46821	2468 aa	Known RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	RIF1	Q5UIP0	2472 aa	Known RBP	3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	REV3L	O60673	3130 aa		3.87	□□□□□ -1.79
TCF12-223	ENST00000561235	XIRP2	A4UGR9	3374 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	MAST4	O15021	2626 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	SMCO2	A6NFE2	343 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	ARGFX	A6NJG6	315 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	PFDN6	O15212	129 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	DNAJB6	O75190	326 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	FAM107A	O95990	144 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	OR8G3P	P0DMU2	310 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	GFAP	P14136	432 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	RAB4A	P20338	218 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	GNA11	P29992	359 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	NTS	P30990	170 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC26A3	P40879	764 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	GSS	P48637	474 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	CASP4	P49662	377 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC26A2	P50443	739 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	AP1S2	P56377	157 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	RPL26	P61254	145 aa	Known RBP	3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	RELA	Q04206	551 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	ENPEP	Q07075	957 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	EGFEM1P	Q0D2K5	195 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	DMC1	Q14565	340 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	ELAVL3	Q14576	367 aa	Known RBP	3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	LRRC26	Q2I0M4	334 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	PIP5KL1	Q5T9C9	394 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	LIN9	Q5TKA1	542 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	RAET1L	Q5VY80	246 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	PTRHD1	Q6GMV3	140 aa	Known RBP	3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	PRMT9	Q6P2P2	845 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	KDM7A	Q6ZMT4	941 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	TGIF2LX	Q8IUE1	241 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	LRRC8A	Q8IWT6	810 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	OR56B4	Q8NH76	319 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	CLHC1	Q8NHS4	586 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	GRPEL2	Q8TAA5	225 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	PDCD6IP	Q8WUM4	868 aa	Known RBP	3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	MYDGF	Q969H8	173 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	C16orf74	Q96GX8	76 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC29A1	Q99808	456 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	NIPSNAP3B	Q9BS92	247 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	CHRDL1	Q9BU40	450 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	SYNDIG1	Q9H7V2	258 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	POPDC2	Q9HBU9	364 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	ZFP14	Q9HCL3	533 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	MYOZ2	Q9NPC6	264 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	SLC2A8	Q9NY64	477 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	NYAP2	Q9P242	653 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	UVRAG	Q9P2Y5	699 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	PHF11	Q9UIL8	331 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	TIMM10B	Q9Y5J6	103 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	CACNG2	Q9Y698	323 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	KIF25-AS1	Q9Y6Z4	181 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	CACNA1H	O95180	2353 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	AGRN	O00468	2067 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	MAP3K15	Q6ZN16	1313 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	MAST2	Q6P0Q8	1798 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	PSME4	Q14997	1843 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	MGAM	O43451	1857 aa		3.86	□□□□□ -1.79
TCF12-223	ENST00000561235	OTOF	Q9HC10	1997 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	FLNB	O75369	2602 aa	Known RBP	3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	LRRC37A	A6NMS7	1700 aa		3.85	□□□□□ -1.79
TCF12-223	ENST00000561235	IGHV7-81	A0A0B4J1V7	117 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms