RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 WACQ9BTA9 647 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 MMADHCQ9H3L0 296 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-214ENST00000557490 PLK3Q9H4B4 646 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 EGLN3Q9H6Z9 239 aa13.7□□□□□ -0.22
TUBB3-214ENST00000557490 NDUFS7O75251 213 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 FKBP6O75344 327 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 E2F6O75461 281 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 LY6G6DO95868 133 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 CCL2P13500 99 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 HIST1H1CP16403 213 aaKnown RBP13.69□□□□□ -0.22
TUBB3-214ENST00000557490 APEX1P27695 318 aaKnown RBP13.69□□□□□ -0.22
TUBB3-214ENST00000557490 CENPAP49450 140 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 NUDT6P53370 316 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 PSG4Q00888 419 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 SYT9Q86SS6 491 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 ALDH16A1Q8IZ83 802 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 AKR7LQ8NHP1 331 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 FOXN4Q96NZ1 517 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 SNX18Q96RF0 628 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 ZNF416Q9BWM5 594 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 DGCR6LQ9BY27 220 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 OR2H1Q9GZK4 316 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 NUAK2Q9H093 628 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 EMC7Q9NPA0 242 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 COA3Q9Y2R0 106 aaPredicted RBP13.69□□□□□ -0.22
TUBB3-214ENST00000557490 PLCE1Q9P212 2302 aa13.69□□□□□ -0.22
TUBB3-214ENST00000557490 TRIM64A6NGJ6 449 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 TRIM64BA6NI03 449 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 H7C1Q1 480 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 SSX4O60224 188 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 GPRIN2O60269 458 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 SNAP29O95721 258 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 SCG5P05408 212 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 CCNOP22674 350 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 STOMP27105 288 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 GDI2P50395 445 aaKnown RBP13.68□□□□□ -0.22
TUBB3-214ENST00000557490 ERFP50548 548 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 CBX1P83916 185 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 SCRN3Q0VDG4 424 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 ENDOGQ14249 297 aaKnown RBP13.68□□□□□ -0.22
TUBB3-214ENST00000557490 UGT2A3Q6UWM9 527 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 SVOPLQ8N434 492 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 CPEB3Q8NE35 698 aaKnown RBP13.68□□□□□ -0.22
TUBB3-214ENST00000557490 NMNAT3Q96T66 252 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 TBC1D23Q9NUY8 699 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 IL20Q9NYY1 176 aa13.68□□□□□ -0.22
TUBB3-214ENST00000557490 SONP18583 2426 aaKnown RBP13.68□□□□□ -0.22
TUBB3-214ENST00000557490 ARRDC5A6NEK1 342 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 FAM171A2A8MVW0 826 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 FAM157BP0CG42 384 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 RAD52P43351 418 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 EFNA4P52798 201 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 LSM6P62312 80 aaKnown RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 COX10Q12887 443 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 SLC35F1Q5T1Q4 408 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 C1orf146Q5VVC0 180 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 RGS7BPQ6MZT1 257 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 PAQR4Q8N4S7 273 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 PAPD5Q8NDF8 572 aaKnown RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 SDR9C7Q8NEX9 313 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 OR52E2Q8NGJ4 325 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 MRPL24Q96A35 216 aaKnown RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 FEVQ99581 238 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 DOK1Q99704 481 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 VRK1Q99986 396 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 TSSK6Q9BXA6 273 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 PLA2G12AQ9BZM1 189 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 WNT5BQ9H1J7 359 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 SRA1Q9HD15 236 aaKnown RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 RPRD1BQ9NQG5 326 aaKnown RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 PDP1Q9P0J1 537 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 EIF3KQ9UBQ5 218 aaKnown RBP13.67□□□□□ -0.22
TUBB3-214ENST00000557490 DNAJB9Q9UBS3 223 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 B9D1Q9UPM9 204 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 BAIAP2Q9UQB8 552 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 POLR1DQ9Y2S0 133 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 FKBP7Q9Y680 259 aa13.67□□□□□ -0.22
TUBB3-214ENST00000557490 C5orf49A4QMS7 147 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 BHLHE40O14503 412 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 CIB2O75838 187 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 SOX14O95416 240 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 LCKP06239 509 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 ERCC1P07992 297 aaPredicted RBP13.66□□□□□ -0.22
TUBB3-214ENST00000557490 EVX1P49640 407 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 PPOXP50336 477 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 ARHGDIAP52565 204 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 UCP2P55851 309 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 DSCR9P59020 149 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 SELENOVP59797 346 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 TNK1Q13470 666 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 AQP6Q13520 282 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 ZNF774Q6NX45 483 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 CLEC2AQ6UVW9 174 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 UNQ6126/PRO20091Q6UXV3 157 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 CD300LDQ6UXZ3 194 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 CCDC121Q6ZUS5 278 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 OR6V1Q8N148 313 aa13.66□□□□□ -0.22
TUBB3-214ENST00000557490 OR8D4Q8NGM9 314 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms