RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DCAF12L2Q5VW00 463 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 RNF130Q86XS8 419 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 CCDC36Q8IYA8 594 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 GSPT2Q8IYD1 628 aaKnown RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 C4orf33Q8N1A6 199 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 GPR137CQ8N3F9 429 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 CADM2Q8N3J6 435 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 SIGLECL1Q8N7X8 197 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 OR8J2Q8NGG1 315 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 SNX33Q8WV41 574 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 TAF15Q92804 592 aaKnown RBP eCLIP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 DVL3Q92997 716 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 TUBGCP3Q96CW5 907 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 LRRC58Q96CX6 371 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 SPDL1Q96EA4 605 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 C1orf147Q96MC9 270 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF75AQ96N20 296 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 OR2M2Q96R28 347 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 SLC35A5Q9BS91 424 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 MECRQ9BV79 373 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 PTDSS2Q9BVG9 487 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF385DQ9H6B1 395 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 NTN4Q9HB63 628 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 DDX28Q9NUL7 540 aaKnown RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 LIN7CQ9NUP9 197 aaKnown RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 IL20Q9NYY1 176 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 B3GAT1Q9P2W7 334 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 SEC14L4Q9UDX3 406 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 MARCOQ9UEW3 520 aaPredicted RBP4.98□□□□□ -1.61
VPS33B-207ENST00000557470 OPN4Q9UHM6 478 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 ZDHHC2Q9UIJ5 367 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 AURKCQ9UQB9 309 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 RCE1Q9Y256 329 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 NOX1Q9Y5S8 564 aa4.98□□□□□ -1.61
VPS33B-207ENST00000557470 WNK1Q9H4A3 2382 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 PRSS51A0A1B0GVH4 220 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 A0A1W2PPW3 197 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 CDHR4A6H8M9 788 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 GAGE10A6NGK3 116 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 DNAJC9-AS1A6NH13 148 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 PRSS29PA6NIE9 313 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 SMIM23A6NLE4 172 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 M0R3G1 203 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 EBAG9O00559 213 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 AHSA1O95433 338 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 CPSF4O95639 269 aaKnown RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 IGHV2-5P01817 119 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 SHBGP04278 402 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 DBIP07108 87 aaKnown RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 NUDT17P0C025 328 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 PRG2P13727 222 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 B4GALT1P15291 398 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF43P17038 809 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 PRTN3P24158 256 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 RPS5P46782 204 aaKnown RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 PTDSS1P48651 473 aaKnown RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 NPY4RP50391 375 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 LUMP51884 338 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 AQP5P55064 265 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 COPZ1P61923 177 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 RPS23P62266 143 aaKnown RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 EMX2Q04743 252 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 EGR4Q05215 589 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 CD69Q07108 199 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 PIGFQ07326 219 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 SF3A3Q12874 501 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 GNA13Q14344 377 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 CASP8Q14790 479 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 TRMT5Q32P41 509 aaKnown RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 PHYHD1Q5SRE7 291 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 CARD17Q5XLA6 110 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 WBP2NLQ6ICG8 309 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF836Q6ZNA1 936 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 LRRC74BQ6ZQY2 392 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 MSANTD1Q6ZTZ1 278 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 VRK2Q86Y07 508 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF440Q8IYI8 595 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 TMEM123Q8N131 208 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 PIK3C3Q8NEB9 887 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 MFSD8Q8NHS3 518 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 SLC25A36Q96CQ1 311 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 RAB39BQ96DA2 213 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 SAT2Q96F10 170 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 OXGR1Q96P68 337 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 TSPAN32Q96QS1 320 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 DPY30Q9C005 99 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 SLC25A32Q9H2D1 315 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 MTHFD2LQ9H903 347 aaPredicted RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 ASIC5Q9NY37 505 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 UBAP1Q9NZ09 502 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF224Q9NZL3 707 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 DUSP13Q9UII6 198 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF346Q9UL40 294 aaKnown RBP4.97□□□□□ -1.61
VPS33B-207ENST00000557470 WIPI2Q9Y4P8 454 aa4.97□□□□□ -1.61
VPS33B-207ENST00000557470 A0A096LPI6 279 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 A0A0B4J203 849 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 IGHV1-69-2A0A0G2JMI3 117 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 TCRBV5S2A0A599 114 aa4.96□□□□□ -1.62
VPS33B-207ENST00000557470 SH2D7A6NKC9 451 aaPredicted RBP4.96□□□□□ -1.62
VPS33B-207ENST00000557470 C17orf100A8MU93 164 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms