RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CISD1Q9NZ45 108 aaKnown RBP4.21□□□□□ -1.74
ATXN3-246ENST00000557030 RPS6KB2Q9UBS0 482 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 FBXL3Q9UKT7 428 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 POMT2Q9UKY4 750 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ASF1AQ9Y294 204 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 PLXNA2O75051 1894 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 MYOFQ9NZM1 2061 aa4.21□□□□□ -1.74
ATXN3-246ENST00000557030 ANKRD12Q6UB98 2062 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 A0A0A6YYD5 115 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 A0A1B0GUV1 79 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 TRABD2BA6NFA1 517 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SLC9B1P1A6NJY1 282 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OR6C65A6NJZ3 312 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 CPSF4LA6NMK7 179 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 RIIAD1A6NNX1 92 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SNRPGP15A8MWD9 76 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF879B4DU55 563 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 L7N2F9 121 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SOCS6O14544 535 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 BCAT2O15382 392 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 FLRT2O43155 660 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 LANCL1O43813 399 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 GPRIN2O60269 458 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 FMO6PO60774 539 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 B4GALT2O60909 372 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 MTRF1O75570 445 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 B3GALNT1O75752 331 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 POP7O75817 140 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SC5DO75845 299 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 IFNGP01579 166 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 IL5P05113 134 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 RAB40ALP0C0E4 278 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 CPN1P15169 458 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 EPCAMP16422 314 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF3P17036 446 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 CSNK2A2P19784 350 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 PSMB1P20618 241 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 GIFP27352 417 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 MAPK3P27361 379 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SHC1P29353 583 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 MPIP34949 423 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 NUP62P37198 522 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 CD79BP40259 229 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 MNDAP41218 407 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 GPR1P46091 355 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ART1P52961 327 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 BLVRAP53004 296 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 TSPAN5P62079 268 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ILF3Q12906 894 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 MADCAM1Q13477 382 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OPCMLQ14982 345 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 RNPS1Q15287 305 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 TCEAL5Q5H9L2 206 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 UBE2NLQ5JXB2 153 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 CLEC12AQ5QGZ9 265 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 C9orf50Q5SZB4 431 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 NDUFAF5Q5TEU4 345 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OLFML2AQ68BL7 652 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 DMKNQ6E0U4 476 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ARL9Q6T311 187 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ARSKQ6UWY0 536 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 C3P1Q6ZMU1 363 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 CEACAM19Q7Z692 300 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SIAH3Q8IW03 269 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 NAXDQ8IW45 347 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 NRMQ8IXM6 262 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 PM20D2Q8IYS1 436 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 CDK20Q8IZL9 346 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SYS1Q8N2H4 156 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 FTMTQ8N4E7 242 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF740Q8NDX6 193 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 VN1R2Q8NFZ6 395 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OR11H4Q8NGC9 324 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OR51G2Q8NGK0 314 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OR5D16Q8NGK9 328 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OR2T35Q8NGX2 323 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OR2T4Q8NH00 348 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OR4Q3Q8NH05 313 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 FANK1Q8TC84 345 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 GANCQ8TET4 914 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 WFIKKN2Q8TEU8 576 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ZNF707Q96C28 371 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 INTS12Q96CB8 462 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OTUB2Q96DC9 234 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 NUS1Q96E22 293 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SLC41A3Q96GZ6 507 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 SAMD8Q96LT4 415 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 NECTIN4Q96NY8 510 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 RBP7Q96R05 134 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 F2RL3Q96RI0 385 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 ABHD1Q96SE0 405 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 MCHR1Q99705 422 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 UTP23Q9BRU9 249 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 DPH7Q9BTV6 452 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 C20orf85Q9H1P6 137 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 OR52A5Q9H2C5 316 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 UBQLN3Q9H347 655 aa4.2□□□□□ -1.74
ATXN3-246ENST00000557030 MTHFD2LQ9H903 347 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 HINT3Q9NQE9 182 aaKnown RBP4.2□□□□□ -1.74
ATXN3-246ENST00000557030 KLHL1Q9NR64 748 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms