RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 RABEP2Q9H5N1 569 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 PURGQ9UJV8 347 aaKnown RBP12.48□□□□□ -0.41
CHD8-211ENST00000556833 MED31Q9Y3C7 131 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 NPTNQ9Y639 398 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 TGP01266 2768 aa12.48□□□□□ -0.41
CHD8-211ENST00000556833 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 FBP2O00757 339 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 ABHD16AO95870 558 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 IGHV2-70P01814 119 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 SCG5P05408 212 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 IFI30P13284 250 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 ERFP50548 548 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 ZNF133P52736 654 aaPredicted RBP12.47□□□□□ -0.41
CHD8-211ENST00000556833 CTXN1P60606 82 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 PSG7Q13046 419 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 KLF17Q5JT82 389 aaPredicted RBP12.47□□□□□ -0.41
CHD8-211ENST00000556833 ITLN1Q8WWA0 313 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 TPD52L3Q96J77 140 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 C4orf45Q96LM5 186 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 C1orf147Q96MC9 270 aaPredicted RBP12.47□□□□□ -0.41
CHD8-211ENST00000556833 ZNF48Q96MX3 618 aaPredicted RBP12.47□□□□□ -0.41
CHD8-211ENST00000556833 TXNIPQ9H3M7 391 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 TMEM106BQ9NUM4 274 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 RHCGQ9UBD6 479 aa12.47□□□□□ -0.41
CHD8-211ENST00000556833 A0A0G2JND7 137 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 FOXH1O75593 365 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 OR5F1O95221 314 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 HKR1P10072 659 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 GATA3P23771 443 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 RBM34P42696 430 aaKnown RBP12.46□□□□□ -0.41
CHD8-211ENST00000556833 ARHGDIAP52565 204 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 RPL27P61353 136 aaKnown RBP12.46□□□□□ -0.41
CHD8-211ENST00000556833 SLC3A1Q07837 685 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 BAMBIQ13145 260 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 ENDOGQ14249 297 aaKnown RBP12.46□□□□□ -0.41
CHD8-211ENST00000556833 ZMYND11Q15326 602 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 MTX3Q5HYI7 312 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 NANOGP8Q6NSW7 305 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 Q6ZR03 302 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 OR5AS1Q8N127 324 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 OR51A7Q8NH64 312 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 SLC7A6Q92536 515 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 NUP50Q9UKX7 468 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 AUP1Q9Y679 476 aa12.46□□□□□ -0.41
CHD8-211ENST00000556833 MDFIC2A0A1B0GVS7 189 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 CENPBD1B2RD01 187 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 DOK2O60496 412 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 GPANK1O95872 356 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 IGHMP01871 453 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 VIMP08670 466 aaKnown RBP12.45□□□□□ -0.42
CHD8-211ENST00000556833 CST2P09228 141 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 HTR5AP47898 357 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 ZNF154Q13106 437 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 FAM27BQ5VT28 67 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 CCDC80Q76M96 950 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 ALDH16A1Q8IZ83 802 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 OR13C2Q8NGS9 318 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 RASSF5Q8WWW0 418 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 LRRC58Q96CX6 371 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 BPIFA2Q96DR5 249 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 ATP6V1G3Q96LB4 118 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 RBP7Q96R05 134 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 ECSITQ9BQ95 431 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 ZNF747Q9BV97 191 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 RERGLQ9H628 205 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 UNKLQ9H9P5 680 aaKnown RBP12.45□□□□□ -0.42
CHD8-211ENST00000556833 SMURF2Q9HAU4 748 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 ELOVL3Q9HB03 270 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 NTN4Q9HB63 628 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 CYSLTR2Q9NS75 346 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 INTS9Q9NV88 658 aaKnown RBP12.45□□□□□ -0.42
CHD8-211ENST00000556833 GMPR2Q9P2T1 348 aaKnown RBP12.45□□□□□ -0.42
CHD8-211ENST00000556833 STX18Q9P2W9 335 aaKnown RBP12.45□□□□□ -0.42
CHD8-211ENST00000556833 BAG5Q9UL15 447 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 ZDHHC8Q9ULC8 765 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 TIMM10BQ9Y5J6 103 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 DOCK11Q5JSL3 2073 aa12.45□□□□□ -0.42
CHD8-211ENST00000556833 J3KTA2 159 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 IGHV4-38-2P0DP08 117 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 MSR1P21757 451 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 OMGP23515 440 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 PRTN3P24158 256 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 GUCA1AP43080 201 aaPredicted RBP12.44□□□□□ -0.42
CHD8-211ENST00000556833 FOXL1Q12952 345 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 CYBRD1Q53TN4 286 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 UNQ6126/PRO20091Q6UXV3 157 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 NRMQ8IXM6 262 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 KLHL36Q8N4N3 616 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 SPICQ8N5J4 248 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 OR10AD1Q8NGE0 317 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 ZNF420Q8TAQ5 688 aaPredicted RBP12.44□□□□□ -0.42
CHD8-211ENST00000556833 POP5Q969H6 163 aaKnown RBP12.44□□□□□ -0.42
CHD8-211ENST00000556833 CMBLQ96DG6 245 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 ALG12Q9BV10 488 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 MRI1Q9BV20 369 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 PATZ1Q9HBE1 687 aaKnown RBP12.44□□□□□ -0.42
CHD8-211ENST00000556833 TNFRSF19Q9NS68 423 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 KLHL21Q9UJP4 597 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 HIF3AQ9Y2N7 669 aa12.44□□□□□ -0.42
CHD8-211ENST00000556833 ADAM18Q9Y3Q7 739 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms