RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 SLC35B4Q969S0 331 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 SORT1Q99523 831 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 ZBTB18Q99592 522 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 NUDT16L1Q9BRJ7 211 aaKnown RBP6.98□□□□□ -1.29
NEK9-206ENST00000555537 PCGF1Q9BSM1 259 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 TMEM109Q9BVC6 243 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 CDADC1Q9BWV3 514 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 SLC19A3Q9BZV2 496 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 KCNN2Q9H2S1 579 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 CCDC134Q9H6E4 229 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 WDR55Q9H6Y2 383 aaPredicted RBP6.98□□□□□ -1.29
NEK9-206ENST00000555537 CCNB1IP1Q9NPC3 277 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.98□□□□□ -1.29
NEK9-206ENST00000555537 LRCH1Q9Y2L9 728 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 RAP2CQ9Y3L5 183 aa6.98□□□□□ -1.29
NEK9-206ENST00000555537 BLOC1S5-TXNDC5H3BN57 136 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 KPNA4O00629 521 aaPredicted RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 SDHDO14521 159 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 PIP5K1CO60331 668 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 TRMUO75648 421 aaKnown RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 MT-ATP6P00846 226 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 IGHG1P01857 330 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 F13BP05160 661 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 ZCCHC18P0CG32 403 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 TNFRSF1AP19438 455 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 SLC1A6P48664 564 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 ERFP50548 548 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 ZNF84P51523 738 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 RGS8P57771 180 aaPredicted RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 NCALDP61601 193 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 LRRC74AQ0VAA2 488 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 ZNF74Q16587 644 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 HIST3H3Q16695 136 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 C6orf10Q5SRN2 563 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 FAM205BPQ63HN1 556 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 OGFOD2Q6N063 350 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 LYPD2Q6UXB3 125 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 LINC00114Q6XXX2 140 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 RANBP3LQ86VV4 465 aaPredicted RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 PDZD9Q8IXQ8 264 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 C19orf18Q8NEA5 215 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 DYRK2Q92630 601 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 NABP1Q96AH0 204 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 CMBLQ96DG6 245 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 THOC1Q96FV9 657 aaKnown RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 RSRC1Q96IZ7 334 aaKnown RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 FAM71F1Q96KD3 344 aaPredicted RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 C4orf45Q96LM5 186 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 OR2V2Q96R30 315 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 TMEM246Q9BRR3 403 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 TMEM43Q9BTV4 400 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 MRPL13Q9BYD1 178 aaKnown RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 WNT5BQ9H1J7 359 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 PPCSQ9HAB8 311 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 MEAF6Q9HAF1 191 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 SIAEQ9HAT2 523 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 GCM1Q9NP62 436 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 A4GALTQ9NPC4 353 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 NANSQ9NR45 359 aa6.97□□□□□ -1.29
NEK9-206ENST00000555537 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.97□□□□□ -1.29
NEK9-206ENST00000555537 CENPVL3A0A0U1RRI6 287 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 ZNF816-ZNF321PA0A0X1KG74 233 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 C5orf63A6NC05 138 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 C22orf46C9J442 243 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 M0R3H8 397 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 CLIC1O00299 241 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 TNFRSF13BO14836 293 aaPredicted RBP6.96□□□□□ -1.3
NEK9-206ENST00000555537 TYROBPO43914 113 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 SLC22A3O75751 556 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 THY1P04216 161 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 SERPINE1P05121 402 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 IL6P05231 212 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 UMPSP11172 480 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 ETS2P15036 469 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 ACADSP16219 412 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 TNFSF4P23510 183 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 LAP3P28838 519 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 EPHA3P29320 983 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 AQP1P29972 269 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 MMP16P51512 607 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 LOXL3P58215 753 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 HOXA4Q00056 320 aaPredicted RBP6.96□□□□□ -1.3
NEK9-206ENST00000555537 FMODQ06828 376 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 TAF11Q15544 211 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 C2orf68Q2NKX9 166 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 NRN1LQ496H8 165 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 ZMAT1Q5H9K5 638 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 VAX1Q5SQQ9 334 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 KPRPQ5T749 579 aaPredicted RBP6.96□□□□□ -1.3
NEK9-206ENST00000555537 DHRS4L2Q6PKH6 230 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 OR5AS1Q8N127 324 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 MUC20Q8N307 709 aaPredicted RBP6.96□□□□□ -1.3
NEK9-206ENST00000555537 TMEM86BQ8N661 226 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 C11orf44Q8N8P7 122 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 ATG16L2Q8NAA4 619 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 ZSCAN4Q8NAM6 433 aaPredicted RBP6.96□□□□□ -1.3
NEK9-206ENST00000555537 CCDC197Q8NCU1 140 aa6.96□□□□□ -1.3
NEK9-206ENST00000555537 TBC1D15Q8TC07 691 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms