RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 BPESC1Q9GZL8 116 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 SHARPINQ9H0F6 387 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 CHODLQ9H9P2 273 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 SCN3BQ9NY72 215 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 NDUFA13Q9P0J0 144 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 LPAR3Q9UBY5 353 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 BAIAP2Q9UQB8 552 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 FKBP7Q9Y680 259 aa9.15□□□□□ -0.94
SHMT2-215ENST00000554656 IGHV2OR16-5A0A0B4J2B6 119 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 LOC100289279A0A1B0GTE1 492 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 TMEM129A0AVI4 362 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 RPL36A-HNRNPH2H7BZ11 118 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 M0R082 166 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 NDUFS8O00217 210 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 TRAF3IP2O43734 574 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-215ENST00000554656 PIP5K1CO60331 668 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 SEC14L2O76054 403 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 VAMP5O95183 116 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 CLPTM1O96005 669 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 CRYAAP02489 173 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 HMGN1P05114 100 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 BMP4P12644 408 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 APEHP13798 732 aaKnown RBP9.14□□□□□ -0.95
SHMT2-215ENST00000554656 IL2RGP31785 369 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 THBS4P35443 961 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 RPL5P46777 297 aaKnown RBP9.14□□□□□ -0.95
SHMT2-215ENST00000554656 PPOXP50336 477 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 UBE2NP61088 152 aaKnown RBP9.14□□□□□ -0.95
SHMT2-215ENST00000554656 CARTPTQ16568 116 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 MSMPQ1L6U9 139 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 PHYHD1Q5SRE7 291 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 FAM120AOSQ5T036 256 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 MEDAGQ5VYS4 303 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 FAM166AQ6J272 317 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 TMEM123Q8N131 208 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 FAM169BQ8N8A8 192 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 OR52L1Q8NGH7 329 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 OR6S1Q8NH40 331 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF417Q8TAU3 575 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 RNF217Q8TC41 542 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 IPCEF1Q8WWN9 437 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-215ENST00000554656 TAAR8Q969N4 342 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 SGTBQ96EQ0 304 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 Q96MT0 163 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 OR2M2Q96R28 347 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF587Q96SQ5 575 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-215ENST00000554656 VRK1Q99986 396 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-215ENST00000554656 KCNS3Q9BQ31 491 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 DUSP21Q9H596 190 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 NOX3Q9HBY0 568 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 GPR35Q9HC97 309 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 MEPEQ9NQ76 525 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-215ENST00000554656 RCE1Q9Y256 329 aa9.14□□□□□ -0.95
SHMT2-215ENST00000554656 LOC390937A0A1W2PQ73 354 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 LRP5LA4QPB2 252 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 A6NHS1 94 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 OR6C65A6NJZ3 312 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 EFCAB9A8MZ26 197 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 B9A039 149 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 PTP4A3O75365 173 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 WBP4O75554 376 aaKnown RBP9.13□□□□□ -0.95
SHMT2-215ENST00000554656 SOX14O95416 240 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 SRD5A1P18405 259 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 MAKP20794 623 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 POU1F1P28069 291 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 GRK5P34947 590 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 GPR4P46093 362 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 IDH3GP51553 393 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-215ENST00000554656 SH3BGRP55822 239 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-215ENST00000554656 GINS1Q14691 196 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 OCLNQ16625 522 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 CEACAM16Q2WEN9 425 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 LAIR2Q6ISS4 152 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF773Q6PK81 442 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 NHLRC1Q6VVB1 395 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 PTCHD4Q6ZW05 846 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 MDP1Q86V88 176 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 NUP37Q8NFH4 326 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 OR2T33Q8NG76 320 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 PFN4Q8NHR9 129 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 FANK1Q8TC84 345 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 APH1BQ8WW43 257 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 OXGR1Q96P68 337 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 DOK1Q99704 481 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 C19orf24Q9BVV8 132 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 NDEL1Q9GZM8 345 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 OR52D1Q9H346 318 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 ZNF442Q9H7R0 627 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 VCX3AQ9NNX9 186 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 C20orf141Q9NUB4 165 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 TBC1D23Q9NUY8 699 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 CLN6Q9NWW5 311 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 KCNS2Q9ULS6 477 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 SIGLEC7Q9Y286 467 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 PCDHGB1Q9Y5G3 927 aa9.13□□□□□ -0.95
SHMT2-215ENST00000554656 SMIM31A0A1B0GVY4 71 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 SNTNA6NMZ2 147 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 MS4A18H0YCH9 400 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 M0R3G1 203 aa9.12□□□□□ -0.95
SHMT2-215ENST00000554656 CDC42EP2O14613 210 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms