RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 GYG2O15488 501 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 IDH3BO43837 385 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 SLC16A7O60669 478 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 LY6HO94772 140 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 CCNB2O95067 398 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 FAM157BP0CG42 384 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 RAP2AP10114 183 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 CRABP1P29762 137 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 GDI2P50395 445 aaKnown RBP13.66□□□□□ -0.22
DDX54-204ENST00000546898 UCP2P55851 309 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 SELENOVP59797 346 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 LSM6P62312 80 aaKnown RBP13.66□□□□□ -0.22
DDX54-204ENST00000546898 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
DDX54-204ENST00000546898 OR2T5Q6IEZ7 315 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 PGM2L1Q6PCE3 622 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 PTCHD4Q6ZW05 846 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 Q71RC1 249 aaPredicted RBP13.66□□□□□ -0.22
DDX54-204ENST00000546898 JAZF1Q86VZ6 243 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 GLB1L2Q8IW92 636 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 AQP12AQ8IXF9 295 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 C1orf174Q8IYL3 243 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 OR52L1Q8NGH7 329 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 OR2T29Q8NH02 315 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 AKR7LQ8NHP1 331 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 CLPTM1LQ96KA5 538 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 SYT3Q9BQG1 590 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 PIMREGQ9BSJ6 248 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 IFT27Q9BW83 186 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 REEP1Q9H902 201 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 NDRG4Q9ULP0 352 aaKnown RBP13.66□□□□□ -0.22
DDX54-204ENST00000546898 CDH10Q9Y6N8 788 aa13.66□□□□□ -0.22
DDX54-204ENST00000546898 IGLV3-9A0A075B6K5 115 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 LOC390937A0A1W2PQ73 354 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 ICMTO60725 284 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 RENP00797 406 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 LCKP06239 509 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 IGFBP1P08833 259 aaPredicted RBP13.65□□□□□ -0.22
DDX54-204ENST00000546898 ADRA2AP08913 450 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 COX5BP10606 129 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 ZNF250P15622 560 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 CDKN2AP42771 156 aaKnown RBP13.65□□□□□ -0.22
DDX54-204ENST00000546898 KLF3P57682 345 aaPredicted RBP13.65□□□□□ -0.22
DDX54-204ENST00000546898 KRTAP1-1Q07627 177 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 AQP6Q13520 282 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 KRTAP21-3Q3LHN1 58 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 ZNF770Q6IQ21 691 aaPredicted RBP13.65□□□□□ -0.22
DDX54-204ENST00000546898 MAPK1IP1LQ8NDC0 245 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 OR9Q2Q8NGE9 314 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 SYNPRQ8TBG9 265 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 C11orf40Q8WZ69 217 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 SAMD8Q96LT4 415 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 NUAK2Q9H093 628 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 RACGAP1Q9H0H5 632 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 EMC7Q9NPA0 242 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 EIF3KQ9UBQ5 218 aaKnown RBP13.65□□□□□ -0.22
DDX54-204ENST00000546898 GPR160Q9UJ42 338 aa13.65□□□□□ -0.22
DDX54-204ENST00000546898 COA3Q9Y2R0 106 aaPredicted RBP13.65□□□□□ -0.22
DDX54-204ENST00000546898 LOC100509620A0A075B734 347 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 A0A1W2PPW3 197 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 C5orf49A4QMS7 147 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 VWC2LB2RUY7 222 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 TP53P04637 393 aaPredicted RBP13.64□□□□□ -0.23
DDX54-204ENST00000546898 SCG5P05408 212 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 CCNOP22674 350 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 NOS3P29474 1203 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 KCNMB1Q16558 191 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 ZNF774Q6NX45 483 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 LEG1Q6P5S2 330 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 UGT2A3Q6UWM9 527 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 RASSF6Q6ZTQ3 369 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 LRP11Q86VZ4 500 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 ADGRG5Q8IZF4 528 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 ZNF540Q8NDQ6 660 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 OR1J1Q8NGS3 322 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 SLC7A6OSQ96CW6 309 aaPredicted RBP13.64□□□□□ -0.23
DDX54-204ENST00000546898 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 OR51B6Q9H340 312 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 RERGLQ9H628 205 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 SLCO1C1Q9NYB5 712 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 IL20Q9NYY1 176 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 MYEF2Q9P2K5 600 aaKnown RBP13.64□□□□□ -0.23
DDX54-204ENST00000546898 REV1Q9UBZ9 1251 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 DUSP13Q9UII6 198 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 FZR1Q9UM11 496 aa13.64□□□□□ -0.23
DDX54-204ENST00000546898 SAMHD1Q9Y3Z3 626 aaKnown RBP13.64□□□□□ -0.23
DDX54-204ENST00000546898 SONP18583 2426 aaKnown RBP13.64□□□□□ -0.23
DDX54-204ENST00000546898 IGLV1-36A0A0B4J1U3 117 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 DHRS12A0PJE2 317 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 H3BSA7 217 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 SGCEO43556 437 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 CD5LO43866 347 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 DOK2O60496 412 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 DNAJC8O75937 253 aaPredicted RBP13.63□□□□□ -0.23
DDX54-204ENST00000546898 DAOP14920 347 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 HIST1H1CP16403 213 aaKnown RBP13.63□□□□□ -0.23
DDX54-204ENST00000546898 HOXB4P17483 251 aaPredicted RBP13.63□□□□□ -0.23
DDX54-204ENST00000546898 GSTM3P21266 225 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 WNT5AP41221 380 aa13.63□□□□□ -0.23
DDX54-204ENST00000546898 ALDH3B1P43353 468 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms