RNA–Protein interactions for RNA: ENST00000546033.1

PTP4A1P2-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 2, humanhuman

BASIC

Gene PTP4A1P2, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P2-201ENST00000546033 PSG4Q00888 419 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 SCRN3Q0VDG4 424 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 TRAP1Q12931 704 aaKnown RBP13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 ARL9Q6T311 187 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 GLB1L2Q8IW92 636 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 C1orf174Q8IYL3 243 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 ZNF540Q8NDQ6 660 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 CPEB3Q8NE35 698 aaKnown RBP13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 OR52L1Q8NGH7 329 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 AKR7LQ8NHP1 331 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 SYNPRQ8TBG9 265 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 SNX33Q8WV41 574 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 GPA33Q99795 319 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 ZNF416Q9BWM5 594 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 OR51B6Q9H340 312 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 REEP1Q9H902 201 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 SLCO1C1Q9NYB5 712 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 VSX1Q9NZR4 365 aaPredicted RBP13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 NDRG4Q9ULP0 352 aaKnown RBP13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 FZR1Q9UM11 496 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 LYVE1Q9Y5Y7 322 aa13.21□□□□□ -0.29
PTP4A1P2-201ENST00000546033 ZFHX3Q15911 3703 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 NAV3Q8IVL0 2385 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ARPC3O15145 178 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 IDH3BO43837 385 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 UBOX5O94941 541 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 MT-ND5P03915 603 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 RAP2AP10114 183 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 GSSP48637 474 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 CENPAP49450 140 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 FXYD6P3P58550 94 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 MS4A2Q01362 244 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 LOXL1Q08397 574 aaPredicted RBP13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 NKPD1Q17RQ9 610 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 OR2T5Q6IEZ7 315 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 PGBD2Q6P3X8 592 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 PGM2L1Q6PCE3 622 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 PAQR4Q8N4S7 273 aaPredicted RBP13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 OR1J1Q8NGS3 322 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 OR2T29Q8NH02 315 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 SAMD8Q96LT4 415 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ELOVL3Q9HB03 270 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 EMC7Q9NPA0 242 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 POLR1DQ9Y2S0 133 aa13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 SAMHD1Q9Y3Z3 626 aaKnown RBP13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 NIPBLQ6KC79 2804 aaeCLIP13.2□□□□□ -0.3
PTP4A1P2-201ENST00000546033 DAOP14920 347 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ZNF250P15622 560 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 USF1P22415 310 aaPredicted RBP13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 GCH1P30793 250 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ARHGDIAP52565 204 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 LSM6P62312 80 aaKnown RBP13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 AQP6Q13520 282 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ENDOGQ14249 297 aaKnown RBP13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 GK3PQ14409 553 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ZNF718Q3SXZ3 478 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 LEG1Q6P5S2 330 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ZNF620Q6ZNG0 422 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 PTCHD4Q6ZW05 846 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 LRP11Q86VZ4 500 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 UBASH3BQ8TF42 649 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 CLPTM1LQ96KA5 538 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 POM121L2Q96KW2 1035 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 SNX18Q96RF0 628 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 NUAK2Q9H093 628 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 WNT5BQ9H1J7 359 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 TPK1Q9H3S4 243 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 TAAR3PQ9P1P4 343 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 COA3Q9Y2R0 106 aaPredicted RBP13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 YLPM1P49750 1951 aaKnown RBP13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ZANQ9Y493 2812 aa13.19□□□□□ -0.3
PTP4A1P2-201ENST00000546033 AQP12BA6NM10 295 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 SGCEO43556 437 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 TLX2O43763 284 aaPredicted RBP13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 CD5LO43866 347 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 DOK2O60496 412 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 COX5BP10606 129 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 GSTM3P21266 225 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 CDKN2AP42771 156 aaKnown RBP13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ALDH3B1P43353 468 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 NR4A2P43354 598 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 MSMPQ1L6U9 139 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 TMEM154Q6P9G4 183 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 UGT2A3Q6UWM9 527 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 AQP12AQ8IXF9 295 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 OR9Q2Q8NGE9 314 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 OR4K13Q8NH42 304 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 FOXN4Q96NZ1 517 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 BTBD10Q9BSF8 475 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 PLEK2Q9NYT0 353 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 CDH10Q9Y6N8 788 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 U3KQV3 271 aa13.18□□□□□ -0.3
PTP4A1P2-201ENST00000546033 NSD1Q96L73 2696 aaPredicted RBP13.17□□□□□ -0.3
PTP4A1P2-201ENST00000546033 IGLV3-9A0A075B6K5 115 aa13.17□□□□□ -0.3
PTP4A1P2-201ENST00000546033 LOC100509620A0A075B734 347 aa13.17□□□□□ -0.3
PTP4A1P2-201ENST00000546033 GNGT2O14610 69 aa13.17□□□□□ -0.3
PTP4A1P2-201ENST00000546033 ABHD16AO95870 558 aa13.17□□□□□ -0.3
PTP4A1P2-201ENST00000546033 CLPTM1O96005 669 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms