RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 ZNF248Q8NDW4 579 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 SLX1AQ9BQ83 275 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 PRO3102Q9H379 93 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 METTL17Q9H7H0 456 aaPredicted RBP15.73■□□□□ 0.11
USH1C-205ENST00000527020 G6PC2Q9NQR9 355 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 MED29Q9NX70 200 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 TAS2R4Q9NYW5 299 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 EMC9Q9Y3B6 208 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 R4GMQ9 66 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 TNRC6BQ9UPQ9 1833 aaKnown RBP15.73■□□□□ 0.11
USH1C-205ENST00000527020 LOC100289279A0A1B0GTE1 492 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 NPIPA5E9PKD4 350 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 ETV2O00321 342 aaPredicted RBP15.73■□□□□ 0.11
USH1C-205ENST00000527020 SCRG1O75711 98 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 TPOP07202 933 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 DNASE1P24855 282 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 PTGDSP41222 190 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 CCL7P80098 99 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 PCGF3Q3KNV8 242 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 LCN10Q6JVE6 187 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 LINC00346Q8IVM7 164 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 OR4C16Q8NGL9 310 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 CHST11Q9NPF2 352 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 PRMT8Q9NR22 394 aaPredicted RBP15.73■□□□□ 0.11
USH1C-205ENST00000527020 NPIPA1Q9UND3 350 aa15.73■□□□□ 0.11
USH1C-205ENST00000527020 NPIPB13A6NJU9 1138 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 CCDC85CA6NKD9 419 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 VSTM2BA6NLU5 285 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 NPIPB4C9JG80 1138 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 ZNF208O43345 1280 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 RBBP9O75884 186 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 PNLIPP16233 465 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 FSTP19883 344 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 EPHA8P29322 1005 aaPredicted RBP15.72■□□□□ 0.11
USH1C-205ENST00000527020 HSF1Q00613 529 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 POU3F1Q03052 451 aaPredicted RBP15.72■□□□□ 0.11
USH1C-205ENST00000527020 DCXRQ7Z4W1 244 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 OR8H1Q8NGG4 311 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 OR4D10Q8NGI6 311 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 EML6Q6ZMW3 1958 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 TRAV18A0A075B6X5 111 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 IGHV5-10-1A0A0J9YXX1 117 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 LOC101059948A0A1B0GTJ6 334 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 LIPT2A6NK58 231 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 DAP3P51398 398 aaKnown RBP15.72■□□□□ 0.11
USH1C-205ENST00000527020 EMP2P54851 167 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 DCDP81605 110 aaKnown RBP15.72■□□□□ 0.11
USH1C-205ENST00000527020 TLE3Q04726 772 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 MFSD13AQ14CX5 517 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 TEX261Q6UWH6 196 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 NHLRC1Q6VVB1 395 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 OR51A2Q8NGJ7 313 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 OR2T35Q8NGX2 323 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 MED30Q96HR3 178 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 DIABLOQ9NR28 239 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 SLC17A5Q9NRA2 495 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 CA10Q9NS85 328 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 PIPOXQ9P0Z9 390 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 U3KQ87 197 aa15.72■□□□□ 0.11
USH1C-205ENST00000527020 H3BML4 177 aa15.71■□□□□ 0.11
USH1C-205ENST00000527020 LMX1BO60663 402 aa15.71■□□□□ 0.11
USH1C-205ENST00000527020 C19orf57Q0VDD7 668 aa15.71■□□□□ 0.11
USH1C-205ENST00000527020 THOC7Q6I9Y2 204 aaKnown RBP15.71■□□□□ 0.11
USH1C-205ENST00000527020 DDIT4LQ96D03 193 aa15.71■□□□□ 0.11
USH1C-205ENST00000527020 SORCS2Q96PQ0 1159 aa15.71■□□□□ 0.11
USH1C-205ENST00000527020 SPSB2Q99619 263 aa15.71■□□□□ 0.11
USH1C-205ENST00000527020 FSCN3Q9NQT6 498 aa15.71■□□□□ 0.11
USH1C-205ENST00000527020 PYCARD-AS1I3L0S3 204 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 AQP8O94778 261 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 IL5P05113 134 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 VSIG10L2P0DP72 767 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 ZNF823P16415 610 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 NAGAP17050 411 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 NR0B2Q15466 257 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 ZNF626Q68DY1 528 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 DNM1P34Q6PK57 102 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 TSSK4Q6SA08 328 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 CPEB2Q7Z5Q1 589 aaKnown RBP15.7■□□□□ 0.1
USH1C-205ENST00000527020 SPICQ8N5J4 248 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 POC1BQ8TC44 478 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 TTC9Q92623 222 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 HLA-CQ95604 372 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 SLC25A44Q96H78 314 aaPredicted RBP15.7■□□□□ 0.1
USH1C-205ENST00000527020 IRF2BPLQ9H1B7 796 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 FANCFQ9NPI8 374 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 B3GAT1Q9P2W7 334 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 CGGBP1Q9UFW8 167 aaPredicted RBP15.7■□□□□ 0.1
USH1C-205ENST00000527020 OR52A1Q9UKL2 312 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 RARRES3Q9UL19 164 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 MRPS18BQ9Y676 258 aaKnown RBP15.7■□□□□ 0.1
USH1C-205ENST00000527020 TRIOBPQ9H2D6 2365 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 LOC107986453A0A1B0GWG9 222 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 MEIS3P1A6NDR6 274 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 SIGLEC6O43699 453 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 ONECUT2O95948 504 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 ISG15P05161 165 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 CD2P06729 351 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 CPN1P15169 458 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 PLPPR5Q32ZL2 321 aa15.7■□□□□ 0.1
USH1C-205ENST00000527020 CORO6Q6QEF8 472 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms