RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TBX5Q99593 518 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 RBM4BQ9BQ04 359 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 C9orf16Q9BUW7 83 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 CDADC1Q9BWV3 514 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 NMNAT2Q9BZQ4 307 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 OR2H1Q9GZK4 316 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 KCNN2Q9H2S1 579 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 POFUT1Q9H488 388 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 ESRP2Q9H6T0 727 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 PLEKHF2Q9H8W4 249 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 SIAEQ9HAT2 523 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC25A19Q9HC21 320 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 USE1Q9NZ43 259 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 DNAJC27Q9NZQ0 273 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 STX18Q9P2W9 335 aaKnown RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 KLHL21Q9UJP4 597 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 BAIAP2Q9UQB8 552 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 KLHDC2Q9Y2U9 406 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 RNF115Q9Y4L5 304 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 LHFPL6Q9Y693 200 aa3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 USP9XQ93008 2570 aaPredicted RBP3.99□□□□□ -1.77
CHMP4A-202ENST00000524955 FBN2P35556 2912 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 HIVEP3Q5T1R4 2406 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 IQCMA0A1B0GVH7 501 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 FAM221AA4D161 298 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 C5orf49A4QMS7 147 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CCDC182A6NF36 153 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 C12orf71A8MTZ7 269 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CENPBD1B2RD01 187 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF593O00488 134 aaPredicted RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SGCEO43556 437 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 NDUFS7O75251 213 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 LY6HO94772 140 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ATP6V1G2O95670 118 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CLPTM1O96005 669 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 NGFP01138 241 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 IGKV3-15P01624 115 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 IGLV1-44P01699 117 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CRYAAP02489 173 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 HMGN1P05114 100 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SERPINA5P05154 406 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SOD3P08294 240 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CST2P09228 141 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC2A1P11166 492 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF823P16415 610 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 NPR2P20594 1047 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 PAICSP22234 425 aaKnown RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 PTAFRP25105 342 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 STOMP27105 288 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 GSTT1P30711 240 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SSTR2P30874 369 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 FMO3P31513 532 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 APLNRP35414 380 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 THBS4P35443 961 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 GGT2P36268 569 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ARR3P36575 388 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 CDKN1AP38936 164 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 WNT5AP41221 380 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 HTR5AP47898 357 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 PCYT1AP49585 367 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 FABP6P51161 128 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 PRKXP51817 358 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 NUDT6P53370 316 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 GALK2Q01415 458 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC34A1Q06495 639 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SNTB2Q13425 540 aaKnown RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 EIF2B1Q14232 305 aaKnown RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 GK3PQ14409 553 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 MAD2L1BPQ15013 274 aaPredicted RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC36A2Q495M3 483 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF672Q499Z4 452 aaPredicted RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 TMEM255AQ5JRV8 349 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 LINC01590Q5TEZ4 76 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 FAM27BQ5VT28 67 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC18B1Q6NT16 456 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 TMEM53Q6P2H8 277 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 DNM1P34Q6PK57 102 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 FOXL2NBQ6ZUU3 175 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 VASH1Q7L8A9 365 aaPredicted RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF627Q7L945 461 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 DPY19L4Q7Z388 723 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 DCXRQ7Z4W1 244 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ZBTB46Q86UZ6 589 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 P2RY8Q86VZ1 359 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF101Q8IZC7 436 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ZCCHC24Q8N2G6 241 aaKnown RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 PARP8Q8N3A8 854 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC30A7Q8NEW0 376 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 OR10S1Q8NGN2 331 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 OR2AJ1Q8NGZ0 328 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 TMEM163Q8TC26 289 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 THEM6Q8WUY1 208 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 NANOS1Q8WY41 292 aaKnown RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 GTF3AQ92664 365 aaKnown RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 MAP6Q96JE9 813 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF582Q96NG8 517 aaPredicted RBP3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 PITX2Q99697 317 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 KCNS3Q9BQ31 491 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 SYT3Q9BQG1 590 aa3.98□□□□□ -1.77
CHMP4A-202ENST00000524955 TMEM204Q9BSN7 226 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms