RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, human

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIO-222	ENST00000515144	OR10J5	Q8NHC4	309 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	PINX1	Q96BK5	328 aa	Known RBP	13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	GIMAP5	Q96F15	307 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	OR2A14	Q96R47	310 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	CORIN	Q9Y5Q5	1042 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	CCL2	P13500	99 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	GPM6A	P51674	278 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	RDH10	Q8IZV5	341 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	VN1R1	Q9GZP7	353 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	SLC23A1	Q9UHI7	598 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	SCAF4	O95104	1147 aa	Known RBP	13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	NID1	P14543	1247 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	YBX1	P67809	324 aa	Known RBP	13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	MOV10	Q9HCE1	1003 aa	Known RBP	13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	KIF26B	Q2KJY2	2108 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	CRYM-AS1	A6NIL9	109 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	GSK3A	P49840	483 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	BAX	Q07812	192 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	AADACL4	Q5VUY2	407 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	GINS3	Q9BRX5	216 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	RTL8A	Q9BWD3	113 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	OCEL1	Q9H607	264 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	LIN7B	Q9HAP6	207 aa		13.11	□□□□□ -0.31
TRIO-222	ENST00000515144	ZNF254	O75437	659 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	GPANK1	O95872	356 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	ITGAM	P11215	1152 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	INSM1	Q01101	510 aa	Predicted RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	SSPN	Q14714	243 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	OGFOD3	Q6PK18	319 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	METAP1D	Q6UB28	335 aa	Predicted RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	MAVS	Q7Z434	540 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	OR51F2	Q8NH61	342 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	RNF128	Q8TEB7	428 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	SPIN2A	Q99865	258 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	SPIN2B	Q9BPZ2	258 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	TCRBV5S1A1T	A0A578	114 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	PRSS36	Q5K4E3	855 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	SAXO2	Q658L1	398 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	RGS7BP	Q6MZT1	257 aa	Predicted RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	TMEM174	Q8WUU8	243 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	CCL17	Q92583	94 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	GHRL	Q9UBU3	117 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	ANKRD33B	A6NCL7	494 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	SC5D	O75845	299 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	ZNF91	Q05481	1191 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	CAMK2B	Q13554	666 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	PDZD9	Q8IXQ8	264 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	TCTEX1D2	Q8WW35	142 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	HAS2	Q92819	552 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	ZDBF2	Q9HCK1	2354 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	LGI1	O95970	557 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	OPRL1	P41146	370 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	EGFL6	Q8IUX8	553 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	LGALS14	Q8TCE9	139 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	SHARPIN	Q9H0F6	387 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	CLEC2D	Q9UHP7	191 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	MOK	Q9UQ07	419 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	ABCD4	O14678	606 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	GFRA3	O60609	400 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	TAS2R46	P59540	309 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	THEM4	Q5T1C6	240 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	OR1J1	Q8NGS3	322 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	UBTD2	Q8WUN7	234 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	PPIL3	Q9H2H8	161 aa	Known RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	TAS2R4	Q9NYW5	299 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	KCNJ8	Q15842	424 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	STK35	Q8TDR2	534 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	FBXW5	Q969U6	566 aa		13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	RIMS4	Q9H426	269 aa	Predicted RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	INTS1	Q8N201	2190 aa	Known RBP	13.1	□□□□□ -0.31
TRIO-222	ENST00000515144	CGB2	Q6NT52	195 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	SLC15A4	Q8N697	577 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	ZFAND1	Q8TCF1	268 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	PIGBOS1	A0A0B4J2F0	54 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	IL7	P13232	177 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	DSCR4	P56555	118 aa	Predicted RBP	13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	EMX1	Q04741	257 aa	Predicted RBP	13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	SELENBP1	Q13228	472 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	FAM53B	Q14153	422 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	FAM122A	Q96E09	287 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	SPNS1	Q9H2V7	528 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	ERVMER34-1	Q9H9K5	563 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	ZNF236	Q9UL36	1845 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	SDK2	Q58EX2	2172 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	CBR3	O75828	277 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	MT-ATP6	P00846	226 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	C7	P10643	843 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	RPL18	Q07020	188 aa	Known RBP	13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	FOXF1	Q12946	379 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	FJX1	Q86VR8	437 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	PAQR8	Q8TEZ7	354 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	ABHD6	Q9BV23	337 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	FCMR	O60667	390 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	HOXB3	P14651	431 aa	Predicted RBP	13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	B4GALNT1	Q00973	533 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	LAIR1	Q6GTX8	287 aa		13.09	□□□□□ -0.31
TRIO-222	ENST00000515144	OR51H1	Q8NH63	302 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 127 ms