RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 FAM120BQ96EK7 910 aaKnown RBP6.03□□□□□ -1.44
CLDND1-229ENST00000513988 LYZL4Q96KX0 146 aa6.03□□□□□ -1.44
CLDND1-229ENST00000513988 EMC6Q9BV81 110 aa6.03□□□□□ -1.44
CLDND1-229ENST00000513988 ACPTQ9BZG2 426 aa6.03□□□□□ -1.44
CLDND1-229ENST00000513988 EXOSC3Q9NQT5 275 aaKnown RBP6.03□□□□□ -1.44
CLDND1-229ENST00000513988 MKS1Q9NXB0 559 aa6.03□□□□□ -1.44
CLDND1-229ENST00000513988 IFNKQ9P0W0 207 aa6.03□□□□□ -1.44
CLDND1-229ENST00000513988 PITPNC1Q9UKF7 332 aa6.03□□□□□ -1.44
CLDND1-229ENST00000513988 MKLN1Q9UL63 735 aa6.03□□□□□ -1.44
CLDND1-229ENST00000513988 CHMP2BQ9UQN3 213 aa6.03□□□□□ -1.44
CLDND1-229ENST00000513988 A6NDX4 124 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 A8MVM7 634 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 CCL24O00175 119 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 MANBAO00462 879 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 DVL1O14640 695 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 FAM20BO75063 409 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 STX11O75558 287 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 AHSA1O95433 338 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 KRT6AP02538 564 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 KRT6BP04259 564 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 IGHV4-30-4P0DP06 118 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 NCF2P19878 526 aaPredicted RBP6.02□□□□□ -1.45
CLDND1-229ENST00000513988 GSTM3P21266 225 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 KRT6CP48668 564 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 GDI2P50395 445 aaKnown RBP6.02□□□□□ -1.45
CLDND1-229ENST00000513988 ARHGDIAP52565 204 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 MFGE8Q08431 387 aaPredicted RBP6.02□□□□□ -1.45
CLDND1-229ENST00000513988 TP53BP2Q13625 1128 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 TAF11Q15544 211 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 MAPK14Q16539 360 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 ANKRD26P1Q6NSI1 321 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 KLHL7Q8IXQ5 586 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 PPIL6Q8IXY8 311 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 Q8N7P7 452 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 PTGR2Q8N8N7 351 aaPredicted RBP6.02□□□□□ -1.45
CLDND1-229ENST00000513988 SLC26A10Q8NG04 563 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 OR10AD1Q8NGE0 317 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 RHEBL1Q8TAI7 183 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 GRK7Q8WTQ7 553 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 GPR22Q99680 433 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 SCRT2Q9NQ03 307 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 PCTPQ9UKL6 214 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 SF3B6Q9Y3B4 125 aaKnown RBP6.02□□□□□ -1.45
CLDND1-229ENST00000513988 LYVE1Q9Y5Y7 322 aa6.02□□□□□ -1.45
CLDND1-229ENST00000513988 PKD1P98161 4303 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 ZNF726A6NNF4 738 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 ICMTO60725 284 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 CDK2AP2O75956 126 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 TPM3P06753 285 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 SNRNP70P08621 437 aaKnown RBP6.01□□□□□ -1.45
CLDND1-229ENST00000513988 RBMY1CP0DJD4 496 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 UQCRBP14927 111 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 ETS2P15036 469 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 CSNK1A1P48729 337 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 INSL3P51460 131 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 PMS2P11Q13670 270 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 FRG1Q14331 258 aaKnown RBP6.01□□□□□ -1.45
CLDND1-229ENST00000513988 SRSF7Q16629 238 aaKnown RBP eCLIP6.01□□□□□ -1.45
CLDND1-229ENST00000513988 HAGHQ16775 308 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 PABPC1L2AQ5JQF8 200 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 SPDYAQ5MJ70 313 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 OLIG3Q7RTU3 272 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 ARMC8Q8IUR7 673 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 UEVLDQ8IX04 471 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 LY6G5BQ8NDX9 201 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 OR4K5Q8NGD3 323 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 OR11L1Q8NGX0 322 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 MFSD8Q8NHS3 518 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 RPS4Y2Q8TD47 263 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 RAX2Q96IS3 184 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 POM121L2Q96KW2 1035 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 OR7D2Q96RA2 312 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 PITX2Q99697 317 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 WACQ9BTA9 647 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 HIPK2Q9H2X6 1198 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 ABCB10Q9NRK6 738 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 TMEM38BQ9NVV0 291 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 TXNDC16Q9P2K2 825 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 ATP6V1HQ9UI12 483 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 CAPN7Q9Y6W3 813 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 DNAH17Q9UFH2 4485 aa6.01□□□□□ -1.45
CLDND1-229ENST00000513988 FTCDNL1E5RQL4 147 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 MS4A18H0YCH9 400 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 AIM2O14862 343 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 SHOXO15266 292 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 NDUFA2O43678 99 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 PIAS1O75925 651 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 OR4F21O95013 312 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 AK1P00568 194 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 GP9P14770 177 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 EFNA1P20827 205 aaPredicted RBP6□□□□□ -1.45
CLDND1-229ENST00000513988 KITLGP21583 273 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 PRKAR1BP31321 381 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 CEBPDP49716 269 aaPredicted RBP6□□□□□ -1.45
CLDND1-229ENST00000513988 RAB13P51153 203 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 ETF1P62495 437 aaKnown RBP6□□□□□ -1.45
CLDND1-229ENST00000513988 KCNJ10P78508 379 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 RABL3Q5HYI8 236 aa6□□□□□ -1.45
CLDND1-229ENST00000513988 SFRP4Q6FHJ7 346 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms