RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ZMYND19Q96E35 227 aaPredicted RBP8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 NMNAT2Q9BZQ4 307 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 RACGAP1Q9H0H5 632 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 DCLRE1BQ9H816 532 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 RNF121Q9H920 327 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 MRPL22Q9NWU5 206 aaKnown RBP8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 B3GNT2Q9NY97 397 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 POLR1DQ9Y2S0 133 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 FKBP7Q9Y680 259 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 TACC2O95359 2948 aa8.53□□□□□ -1.04
TOPBP1-209ENST00000513818 UNC79Q9P2D8 2635 aa8.52□□□□□ -1.04
TOPBP1-209ENST00000513818 ATP6V1G2-DDX39BF2Z307 99 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 DLGAP1O14490 977 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 ABCD4O14678 606 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CASQ2O14958 399 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 AHCYL1O43865 530 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 MGRN1O60291 552 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 SELENOFO60613 162 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CTAG2O75638 210 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 UBL3O95164 117 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 ATP6V1G2O95670 118 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 RAB36O95755 333 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CLIC3O95833 236 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 HMGN1P05114 100 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 MRPL3P09001 348 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 MMP7P09237 267 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CCL2P13500 99 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 NPR2P20594 1047 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 PAICSP22234 425 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CD40P25942 277 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CALCRP30988 508 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC25A1P53007 311 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 RPS7P62081 194 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 RAB1AP62820 205 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 TEKQ02763 1124 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 APOFQ13790 326 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC36A2Q495M3 483 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 BEX5Q5H9J7 111 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 PABPC1L2AQ5JQF8 200 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 NCMAPQ5T1S8 102 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 ZBTB46Q86UZ6 589 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 P2RY8Q86VZ1 359 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF584Q8IVC4 421 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 SMAP2Q8WU79 429 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 NANOS1Q8WY41 292 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 UBE2FQ969M7 185 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 RADILQ96JH8 1075 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC38A2Q96QD8 506 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CLEC4MQ9H2X3 399 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 OR51B6Q9H340 312 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 WDR76Q9H967 626 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 SIAEQ9HAT2 523 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CCNB1IP1Q9NPC3 277 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 OBP2BQ9NPH6 170 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 DNAJC27Q9NZQ0 273 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 ASH2LQ9UBL3 628 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 ENOPH1Q9UHY7 261 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 LHFPL6Q9Y693 200 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 COMMD3-BMI1R4GMX3 469 aa8.52□□□□□ -1.05
TOPBP1-209ENST00000513818 CSMD2Q7Z408 3487 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CCDC182A6NF36 153 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CYSRT1A8MQ03 144 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 TLX2O43763 284 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 DOK2O60496 412 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 APOL3O95236 402 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 IGKV3-15P01624 115 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 IGLV1-44P01699 117 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CD3EP07766 207 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CST2P09228 141 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 SPARCP09486 303 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CBR1P16152 277 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC2A5P22732 501 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 APEX1P27695 318 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 GGT2P36268 569 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 NAA10P41227 235 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 GUCA1AP43080 201 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 ADAM8P78325 824 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 PSG4Q00888 419 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 HSF2Q03933 536 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 GLO1Q04760 184 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 DAZAP2Q15038 168 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 LINC01590Q5TEZ4 76 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 FAM27BQ5VT28 67 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF774Q6NX45 483 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 TMEM53Q6P2H8 277 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 TMEM154Q6P9G4 183 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF704Q6ZNC4 412 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CFAP77Q6ZQR2 320 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 ERI1Q8IV48 349 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 PAQR4Q8N4S7 273 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CPEB3Q8NE35 698 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 OR10H5Q8NGA6 315 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 TMEM163Q8TC26 289 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 CYGBQ8WWM9 190 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 SLC7A6Q92536 515 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 PTP4A1Q93096 173 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 BOD1Q96IK1 185 aa8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 EAF1Q96JC9 268 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-209ENST00000513818 ZNF75AQ96N20 296 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms