RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 KIAA1217Q5T5P2 1943 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 PRKRAO75569 313 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 F13BP05160 661 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 FOLR3P41439 243 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 EXOSC7Q15024 291 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 FAM209BQ5JX69 171 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 STAC2Q6ZMT1 411 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 CBLN2Q8IUK8 224 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 PRR22Q8IZ63 422 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 MUC20Q8N307 709 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 RNF128Q8TEB7 428 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 RRNAD1Q96FB5 475 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 PARP12Q9H0J9 701 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 PLEKHJ1Q9NW61 149 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 ATXN7L1Q9ULK2 861 aaPredicted RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 PTRH2Q9Y3E5 179 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 LY75O60449 1722 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 ANKRD31Q8N7Z5 1873 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 POM121BA6NF01 834 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 GATCO43716 136 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 SFTA3P0C7M3 94 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 TMEM225BP0DP42 221 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 AKR1C3P42330 323 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 DIO1P49895 249 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 RAB4BP61018 213 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 TIAL1Q01085 375 aaKnown RBP eCLIP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 LTB4RQ15722 352 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 Q5BKY6 102 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 MFSD12Q6NUT3 480 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 FBXW12Q6X9E4 464 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF100Q8IYN0 542 aa10.29□□□□□ -0.76
TCOF1-211ENST00000513346 EXOGQ9Y2C4 368 aaKnown RBP10.29□□□□□ -0.76
TCOF1-211ENST00000513346 H0YGG7 62 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 BRINP1O60477 761 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 PMP2P02689 132 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 NMBP08949 121 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 ZFP36L2P47974 494 aaKnown RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF239Q16600 458 aaKnown RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 Q3ZCU0 254 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 SLC22A6Q4U2R8 563 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 CD300LGQ6UXG3 332 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 ADAMTSL4Q6UY14 1074 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 MEX3BQ6ZN04 569 aaKnown RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 TMPPEQ6ZT21 453 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 LIMS2Q7Z4I7 341 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 LYG2Q86SG7 212 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 PPP1R3BQ86XI6 285 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 OR9A4Q8NGU2 314 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 OR14L1PQ8NHC6 308 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 FBXO7Q9Y3I1 522 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 COL11A2P13942 1736 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 DOCK3Q8IZD9 2030 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 FER1L6Q2WGJ9 1857 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 CX3CR1P49238 355 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 MRPL49Q13405 166 aaKnown RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF750Q32MQ0 723 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 RTL6Q6ICC9 239 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 SLC48A1Q6P1K1 146 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 SLC35D2Q76EJ3 337 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 C1orf87Q8N0U7 546 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 C15orf54Q8N8G6 183 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 GPR32P1Q8NGA4 272 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 OR14A16Q8NHC5 309 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 FAM71F1Q96KD3 344 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 SDHCQ99643 169 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 PIGQQ9BRB3 760 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 ULBP3Q9BZM4 244 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 ICKQ9UPZ9 632 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 ANKRD61A6NGH8 418 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 GSTZ1O43708 216 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 NME2P1O60361 137 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 DFFBO76075 338 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 WISP3O95389 354 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 GPR75O95800 540 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 F10P00742 488 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 TLE4Q04727 773 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 DLX2Q07687 328 aaPredicted RBP10.28□□□□□ -0.76
TCOF1-211ENST00000513346 BHLHA9Q7RTU4 235 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 LILRB2Q8N423 598 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 AKR1E2Q96JD6 320 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 RNF170Q96K19 258 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 LRFN5Q96NI6 719 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 PRRX2Q99811 253 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 ZNF442Q9H7R0 627 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 GPR160Q9UJ42 338 aa10.28□□□□□ -0.76
TCOF1-211ENST00000513346 KCNE1BA0A087WTH5 132 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 TMEM235A6NFC5 223 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 TGOLN2O43493 480 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 LANCL1O43813 399 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 NSA2O95478 260 aaKnown RBP10.27□□□□□ -0.76
TCOF1-211ENST00000513346 ITGB2P05107 769 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 CALCRP30988 508 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 NPY4RP50391 375 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 WBP2NLQ6ICG8 309 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 ZSCAN4Q8NAM6 433 aaPredicted RBP10.27□□□□□ -0.76
TCOF1-211ENST00000513346 OR56B1Q8NGI3 324 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 C19orf12Q9NSK7 152 aa10.27□□□□□ -0.76
TCOF1-211ENST00000513346 SERTM1A2A2V5 107 aa10.27□□□□□ -0.77
TCOF1-211ENST00000513346 TMEM202A6NGA9 273 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms