RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 MEF2DQ14814 521 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 CDK5R1Q15078 307 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 PCGF3Q3KNV8 242 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 TMEM176BQ3YBM2 270 aaPredicted RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 HIKESHIQ53FT3 197 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 PRRT3Q5FWE3 981 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 ZNF311Q5JNZ3 666 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 FAM27D1Q5T7N8 215 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 ZNF585AQ6P3V2 769 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 NIPAL3Q6P499 406 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 OPN5Q6U736 354 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 UNQ6126/PRO20091Q6UXV3 157 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 GDPD4Q6W3E5 623 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 FCRLAQ7L513 359 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 NUFIP2Q7Z417 695 aaKnown RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 TAF8Q7Z7C8 310 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 BIVMQ86UB2 503 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 THOC6Q86W42 341 aaKnown RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 GKN2Q86XP6 184 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 MRPL41Q8IXM3 137 aaKnown RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 KDM8Q8N371 416 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 SLC35G3Q8N808 338 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 PNPLA1Q8N8W4 532 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 CLEC1AQ8NC01 280 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 NOXO1Q8NFA2 376 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 OR2M7Q8NG81 312 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 OR4S1Q8NGB4 309 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 STT3BQ8TCJ2 826 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 RNASE8Q8TDE3 154 aaKnown RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 GPX8Q8TED1 209 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 ABHD5Q8WTS1 349 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 METTL21AQ8WXB1 218 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 DNASE2BQ8WZ79 361 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 THRSPQ92748 146 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 EXTL1Q92935 676 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 TMEM106AQ96A25 262 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 ANKRD9Q96BM1 317 aaPredicted RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 SMIM19Q96E16 107 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 KTI12Q96EK9 354 aaPredicted RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 ZNF764Q96H86 408 aaPredicted RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 TMEM19Q96HH6 336 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 C5orf34Q96MH7 638 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 GAL3ST4Q96RP7 486 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 PHB2Q99623 299 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 SYT3Q9BQG1 590 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 FAM83CQ9BQN1 747 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 MIEN1Q9BRT3 115 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 GPR87Q9BY21 358 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 CNTNAP3Q9BZ76 1288 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 SLC5A7Q9GZV3 580 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 DPEP2Q9H4A9 486 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 ELP3Q9H9T3 547 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 IL21RQ9HBE5 538 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 LPAR2Q9HBW0 351 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 CSNK1G1Q9HCP0 422 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 BCL2L10Q9HD36 194 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 FAM212BQ9NTI7 297 aaPredicted RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 TDP1Q9NUW8 608 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 OR5AC2Q9NZP5 309 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 MARCH2Q9P0N8 246 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 OR5V1Q9UGF6 321 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 IL20RAQ9UHF4 553 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 ZNF230Q9UIE0 474 aaPredicted RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 IKZF2Q9UKS7 526 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 FARSAQ9Y285 508 aaKnown RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 PRG3Q9Y2Y8 225 aaPredicted RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 CLDN16Q9Y5I7 305 aa5.42□□□□□ -1.54
LINC01340-201ENST00000504012 NYNRINQ9P2P1 1898 aaKnown RBP5.42□□□□□ -1.54
LINC01340-201ENST00000504012 KIAA1671Q9BY89 1806 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 KIAA1217Q5T5P2 1943 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 IGLV3-10A0A075B6K4 115 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 A0A087WUU8 490 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 SMIM28A0A1B0GU29 152 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 XKRY2A2RUG3 117 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 CLEC18AA5D8T8 446 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 ZBTB42B2RXF5 422 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 HHLA1C9JL84 531 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 TCF21O43680 179 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 HBP1O60381 514 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 PRAMEF11O60813 436 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 ZNF432O94892 652 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 SCGB1D1O95968 90 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 TOMM40O96008 361 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 KNG1P01042 644 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 IFNA21P01568 189 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 AMBPP02760 352 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 SOD2P04179 222 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 GJB1P08034 283 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 MMP3P08254 477 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 MPC1LP0DKB6 136 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 TMEM225BP0DP42 221 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 GTF2F2P13984 249 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 CSRP1P21291 193 aaKnown RBP5.41□□□□□ -1.54
LINC01340-201ENST00000504012 TNFSF4P23510 183 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 DTYMKP23919 212 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 LMO2P25791 158 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 AOAHP28039 575 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 OR10J1P30954 320 aa5.41□□□□□ -1.54
LINC01340-201ENST00000504012 TIA1P31483 386 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC01340-201ENST00000504012 PRSS3P35030 304 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms