RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 TDHQ8IZJ6 230 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 PLPP5Q8NEB5 264 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 OR51A2Q8NGJ7 313 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 ANGPTL6Q8NI99 470 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 STT3BQ8TCJ2 826 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 ASB10Q8WXI3 467 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 RADILQ96JH8 1075 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 CLEC4MQ9H2X3 399 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 GPN1Q9HCN4 374 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 PRMT8Q9NR22 394 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 PPIEQ9UNP9 301 aaKnown RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
CLIP1-204ENST00000501271 EMC9Q9Y3B6 208 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 HRH3Q9Y5N1 445 aa8.84□□□□□ -0.99
CLIP1-204ENST00000501271 RALGAPA1Q6GYQ0 2036 aa8.84□□□□□ -1
CLIP1-204ENST00000501271 LOC101059948A0A1B0GTJ6 334 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 A0A1W2PPC1 479 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 OR2M5A3KFT3 312 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 GTF2F2P13984 249 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 CXCL2P19875 107 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 CRABP1P29762 137 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 DHODHQ02127 395 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 SQSTM1Q13501 440 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 OR7A5Q15622 319 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 HYAL4Q2M3T9 481 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 C2orf68Q2NKX9 166 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 TOR2AQ5JU69 321 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 ARSKQ6UWY0 536 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 SLC38A9Q8NBW4 561 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 SLC26A10Q8NG04 563 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 OR51S1Q8NGJ8 323 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 DVL3Q92997 716 aaPredicted RBP8.83□□□□□ -1
CLIP1-204ENST00000501271 PMEPA1Q969W9 287 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 GAL3ST1Q99999 423 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 ATG5Q9H1Y0 275 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 ZNF768Q9H5H4 540 aaKnown RBP8.83□□□□□ -1
CLIP1-204ENST00000501271 CGGBP1Q9UFW8 167 aaPredicted RBP8.83□□□□□ -1
CLIP1-204ENST00000501271 SUSD2Q9UGT4 822 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 VDAC3Q9Y277 283 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 PLSCR5A0PG75 271 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 ANKUB1A6NFN9 424 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 M0R233 179 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 LMX1BO60663 402 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 OR2A4O95047 310 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 IFNA7P01567 189 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 HRGP04196 525 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 CD3DP04234 171 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 FSTP19883 344 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 PTGS2P35354 604 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 UBE2MP61081 183 aaKnown RBP8.83□□□□□ -1
CLIP1-204ENST00000501271 GLYATL3Q5SZD4 288 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 TMEM205Q6UW68 189 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 DCXRQ7Z4W1 244 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 ZNF454Q8N9F8 522 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 UXS1Q8NBZ7 420 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 CLEC1AQ8NC01 280 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 OR5M1Q8NGP8 315 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 OR6N1Q8NGY5 312 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 OR8S1Q8NH09 359 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 ST7LQ8TDW4 575 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 TMEM234Q8WY98 164 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 SLC25A44Q96H78 314 aaPredicted RBP8.83□□□□□ -1
CLIP1-204ENST00000501271 OR2A7Q96R45 310 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 TTYH1Q9H313 450 aaPredicted RBP8.83□□□□□ -1
CLIP1-204ENST00000501271 G6PC2Q9NQR9 355 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 MED29Q9NX70 200 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 TAS2R8Q9NYW2 309 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 CKLFQ9UBR5 152 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 UBQLN2Q9UHD9 624 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 MRPS18BQ9Y676 258 aaKnown RBP8.83□□□□□ -1
CLIP1-204ENST00000501271 R4GMQ9 66 aa8.83□□□□□ -1
CLIP1-204ENST00000501271 LOC107986453A0A1B0GWG9 222 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 SHISA8B8ZZ34 492 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 NPIPA5E9PKD4 350 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 TIAF1O95411 115 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 RLN1P04808 185 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 CD2P06729 351 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 AKAIN1P0CW23 69 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 HTR2CP28335 458 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 PRSS3P35030 304 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 RAP2BP61225 183 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 POU3F1Q03052 451 aaPredicted RBP8.82□□□□□ -1
CLIP1-204ENST00000501271 FOXF1Q12946 379 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 FAM209AQ5JX71 171 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 WDR74Q6RFH5 385 aaPredicted RBP8.82□□□□□ -1
CLIP1-204ENST00000501271 C5orf46Q6UWT4 87 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 ANKRD37Q7Z713 158 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 KMT5CQ86Y97 462 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 MISPQ8IVT2 679 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 NFAM1Q8NET5 270 aaPredicted RBP8.82□□□□□ -1
CLIP1-204ENST00000501271 OR13C3Q8NGS6 347 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 GPX8Q8TED1 209 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 ELMOD3Q96FG2 381 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 KCNK17Q96T54 332 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 SLC17A5Q9NRA2 495 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 MED11Q9P086 117 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 ATXN7L1Q9ULK2 861 aaPredicted RBP8.82□□□□□ -1
CLIP1-204ENST00000501271 NPIPA1Q9UND3 350 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 DCDC2BA2VCK2 349 aa8.82□□□□□ -1
CLIP1-204ENST00000501271 BCAT2O15382 392 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms