RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 SLC22A3O75751 556 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 HOXB9P17482 250 aaPredicted RBP13□□□□□ -0.33
HDAC6-236ENST00000498808 CPT2P23786 658 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 EPHA3P29320 983 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 TAF11Q15544 211 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 HHATQ5VTY9 493 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 SLC27A4Q6P1M0 643 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 MSANTD1Q6ZTZ1 278 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 ZER1Q7Z7L7 766 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 EIF1ADQ8N9N8 165 aaKnown RBP13□□□□□ -0.33
HDAC6-236ENST00000498808 NEIL1Q96FI4 390 aaPredicted RBP13□□□□□ -0.33
HDAC6-236ENST00000498808 OR2V2Q96R30 315 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 ZNF607Q96SK3 696 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 SPATA5L1Q9BVQ7 753 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 CDADC1Q9BWV3 514 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 OR2H1Q9GZK4 316 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 PAIP1Q9H074 479 aaKnown RBP13□□□□□ -0.33
HDAC6-236ENST00000498808 RMND5AQ9H871 391 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 GCM1Q9NP62 436 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 SLCO1B3Q9NPD5 702 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 MIOXQ9UGB7 285 aa13□□□□□ -0.33
HDAC6-236ENST00000498808 TET2Q6N021 2002 aaPredicted RBP13□□□□□ -0.33
HDAC6-236ENST00000498808 CHP2O43745 196 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 LYPD3O95274 346 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 THY1P04216 161 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 CSF1P09603 554 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 ASAH2BP0C7U1 165 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 Q6ZSV7 163 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 RANBP3LQ86VV4 465 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-236ENST00000498808 KRT73Q86Y46 540 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 KIRREL3Q8IZU9 778 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 OR9I1Q8NGQ6 314 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 ZNF420Q8TAQ5 688 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-236ENST00000498808 C10orf82Q8WW14 230 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 ASB10Q8WXI3 467 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 GTF2H4Q92759 462 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 NMD3Q96D46 503 aaKnown RBP12.99□□□□□ -0.33
HDAC6-236ENST00000498808 PLEKHA8Q96JA3 519 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 C4orf45Q96LM5 186 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 TMEM246Q9BRR3 403 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 ELOVL3Q9HB03 270 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 MAN2C1Q9NTJ4 1040 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 ZNF229Q9UJW7 825 aa12.99□□□□□ -0.33
HDAC6-236ENST00000498808 CENPBD1B2RD01 187 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 C22orf46C9J442 243 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 MCIDASD6RGH6 385 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 KPNA4O00629 521 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-236ENST00000498808 BIRC5O15392 142 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 CYB5R3P00387 301 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-236ENST00000498808 IGHV4-59P01825 116 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 F13BP05160 661 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 SFTPBP07988 381 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 IDO1P14902 403 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 ACADSP16219 412 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 KITLGP21583 273 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 BGNP21810 368 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 PITPNBP48739 271 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 ERFP50548 548 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 ARHGDIAP52565 204 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 CDK6Q00534 326 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 FMODQ06828 376 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 SGCAQ16586 387 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 GCNT6Q5T4J0 391 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 REEP3Q6NUK4 255 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 ZNF613Q6PF04 617 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 REC114Q7Z4M0 266 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 ZSCAN4Q8NAM6 433 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-236ENST00000498808 TBC1D15Q8TC07 691 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 MCHR1Q99705 422 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 PCGF1Q9BSM1 259 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 RAD21L1Q9H4I0 556 aa12.98□□□□□ -0.33
HDAC6-236ENST00000498808 NOTCH3Q9UM47 2321 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 CENPVL3A0A0U1RRI6 287 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 BLOC1S5-TXNDC5H3BN57 136 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 M0R3H8 397 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 SURF4O15260 269 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 UMPSP11172 480 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 GSTM3P21266 225 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 UGT2B15P54855 530 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 RPL18Q07020 188 aaKnown RBP12.97□□□□□ -0.33
HDAC6-236ENST00000498808 NPTX1Q15818 432 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 ZNF404Q494X3 552 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 RUNDC3AQ59EK9 446 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 TTMPQ5BVD1 217 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 FAM201AQ5SY85 155 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 FAM27BQ5VT28 67 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 WDR25Q64LD2 544 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-236ENST00000498808 SLC2A7Q6PXP3 512 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 NANOGNBQ7Z5D8 188 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 TSPYL5Q86VY4 417 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-236ENST00000498808 MSRB3Q8IXL7 192 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 OR8B3Q8NGG8 313 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 VANGL1Q8TAA9 524 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-236ENST00000498808 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 NSMAFQ92636 917 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 OR8B2Q96RD0 313 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 TBX15Q96SF7 602 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 SMURF2Q9HAU4 748 aa12.97□□□□□ -0.33
HDAC6-236ENST00000498808 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms