RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 ZNF470Q6ECI4 717 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 TRIM40Q6P9F5 258 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 DNM1P46Q6ZS02 220 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 PRSS41Q7RTY9 318 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 ABHD12BQ7Z5M8 362 aaPredicted RBP2.62□□□□□ -1.99
CLK1-214ENST00000496205 HSD17B13Q7Z5P4 300 aaPredicted RBP2.62□□□□□ -1.99
CLK1-214ENST00000496205 ZNF589Q86UQ0 364 aaPredicted RBP2.62□□□□□ -1.99
CLK1-214ENST00000496205 TGIF2LYQ8IUE0 185 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 ZNF584Q8IVC4 421 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 NRMQ8IXM6 262 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 KIR2DL5AQ8N109 375 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 CADM2Q8N3J6 435 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 FTMTQ8N4E7 242 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 CCDC71LQ8N9Z2 235 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 OR56A4Q8NGH8 313 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 OR2G2Q8NGZ5 317 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 KIR2DL5BQ8NHK3 375 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 CT45A3Q8NHU0 189 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 LGALS14Q8TCE9 139 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 SLC7A13Q8TCU3 470 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 SMARCD2Q92925 531 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 APH1AQ96BI3 265 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 RPUSD4Q96CM3 377 aaKnown RBP2.62□□□□□ -1.99
CLK1-214ENST00000496205 RNF170Q96K19 258 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 TMEM246Q9BRR3 403 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 MED10Q9BTT4 135 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 BBS2Q9BXC9 721 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 NEUROG2Q9H2A3 272 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 ARMC7Q9H6L4 198 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 RNF167Q9H6Y7 350 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 PRSS16Q9NQE7 514 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 EXD2Q9NVH0 621 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 MCUBQ9NWR8 336 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 CLN6Q9NWW5 311 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 DCDC2Q9UHG0 476 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 ENPP5Q9UJA9 477 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 PSMD13Q9UNM6 376 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 YARS2Q9Y2Z4 477 aaKnown RBP2.62□□□□□ -1.99
CLK1-214ENST00000496205 FADS3Q9Y5Q0 445 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 ZNF646O15015 1829 aaPredicted RBP2.62□□□□□ -1.99
CLK1-214ENST00000496205 LRRK1Q38SD2 2015 aa2.62□□□□□ -1.99
CLK1-214ENST00000496205 JCADQ9P266 1359 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 FAM231BA6NCW3 169 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 E7ENQ6 273 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 ITGB1BP1O14713 200 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 HCRTR1O43613 425 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 CLDN11O75508 207 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 PLEKHA8P1O95397 391 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 AHSA1O95433 338 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 LSM8O95777 96 aaKnown RBP2.61□□□□□ -1.99
CLK1-214ENST00000496205 FGGP02679 453 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 PNMA6AP0CW24 399 aaPredicted RBP2.61□□□□□ -1.99
CLK1-214ENST00000496205 MGMTP16455 207 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 SLC2A5P22732 501 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 ZBTB25P24278 435 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 PSMB6P28072 239 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 HTR2CP28335 458 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 RBMXP38159 391 aaKnown RBP2.61□□□□□ -1.99
CLK1-214ENST00000496205 KIR2DS4P43632 304 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 GSSP48637 474 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 BLVRAP53004 296 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 TAS2R39P59534 338 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 VSNL1P62760 191 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 SKP1P63208 163 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 IRX3P78415 501 aaPredicted RBP2.61□□□□□ -1.99
CLK1-214ENST00000496205 MRPS15P82914 257 aaKnown RBP2.61□□□□□ -1.99
CLK1-214ENST00000496205 PSMD5Q16401 504 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 VAX1Q5SQQ9 334 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 AP1ARQ63HQ0 302 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 ANKRD26P1Q6NSI1 321 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 C8orf74Q6P047 294 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 RFLNAQ6ZTI6 216 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 PPP1R27Q86WC6 154 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 RDH10Q8IZV5 341 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 TRAM1L1Q8N609 369 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 ACOT4Q8N9L9 421 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 NECAP1Q8NC96 275 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 OR6K2Q8NGY2 324 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 ACER1Q8TDN7 264 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 C7orf33Q8WU49 177 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 C17orf50Q8WW18 174 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 GTF2H4Q92759 462 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 NEIL2Q969S2 332 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 FGGYQ96C11 551 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 CMTM7Q96FZ5 175 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 DNAJC1Q96KC8 554 aaKnown RBP2.61□□□□□ -1.99
CLK1-214ENST00000496205 MS4A4EQ96PG1 132 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 HIST1H4GQ99525 98 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 MRPL45Q9BRJ2 306 aaKnown RBP2.61□□□□□ -1.99
CLK1-214ENST00000496205 CALN1Q9BXU9 219 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 OR51J1Q9H342 316 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 PTGES2Q9H7Z7 377 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 ANKHQ9HCJ1 492 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 STMN3Q9NZ72 180 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 IL17CQ9P0M4 197 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 B4GALT7Q9UBV7 327 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 GGA2Q9UJY4 613 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 SLC22A14Q9Y267 594 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 GOLT1BQ9Y3E0 138 aa2.61□□□□□ -1.99
CLK1-214ENST00000496205 CBY1Q9Y3M2 126 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms