RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ZNF782Q6ZMW2 699 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 ZNF704Q6ZNC4 412 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 C9orf62Q8N4C0 152 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 NOX3Q9HBY0 568 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 MED29Q9NX70 200 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 PILRBQ9UKJ0 227 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 MGAT4AQ9UM21 535 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 RPH3AQ9Y2J0 694 aaPredicted RBP9.92□□□□□ -0.82
CMSS1-208ENST00000496116 EMC9Q9Y3B6 208 aa9.92□□□□□ -0.82
CMSS1-208ENST00000496116 IGLV3-32A0A0A0MS00 114 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 A0A1W2PNV4 684 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 MEGF11A6BM72 1044 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 H7C417 338 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 MEN1O00255 615 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 ARPC1BO15143 372 aaKnown RBP9.91□□□□□ -0.82
CMSS1-208ENST00000496116 OR2J2O76002 312 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 ISG15P05161 165 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 PTHLHP12272 177 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 ACHEP22303 614 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 DCTDP32321 178 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 DNASE1L1P49184 302 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 VEGFCP49767 419 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 PLPPR5Q32ZL2 321 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 PCGF3Q3KNV8 242 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 TMEM255AQ5JRV8 349 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 PHF19Q5T6S3 580 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 C3orf33Q6P1S2 294 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 MAMSTRQ6ZN01 415 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 MDGA2Q7Z553 956 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 BMPERQ8N8U9 685 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 PLPP7Q8NBV4 271 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 OR10H5Q8NGA6 315 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 OR13C3Q8NGS6 347 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 SLC25A44Q96H78 314 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-208ENST00000496116 RBP7Q96R05 134 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 DEFB126Q9BYW3 111 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 BEX1Q9HBH7 125 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 GPN1Q9HCN4 374 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-208ENST00000496116 ZFP64Q9NPA5 681 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 MTFP1Q9UDX5 166 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 NXT1Q9UKK6 140 aaKnown RBP9.91□□□□□ -0.82
CMSS1-208ENST00000496116 OR52A1Q9UKL2 312 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 FBXL3Q9UKT7 428 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 FLVCR2Q9UPI3 526 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 VCANP13611 3396 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 RALGAPA1Q6GYQ0 2036 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 A0A0C4DFX4 3053 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 TMEM269A0A1B0GVZ9 245 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 A0A1W2PQ72 361 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 AKR7A2O43488 359 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 SRSF10O75494 262 aaKnown RBP9.91□□□□□ -0.82
CMSS1-208ENST00000496116 H2BFMP0C1H6 154 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 FBXO45P0C2W1 286 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 UBCP0CG48 685 aaKnown RBP9.91□□□□□ -0.82
CMSS1-208ENST00000496116 IGFBP3P17936 291 aaPredicted RBP9.91□□□□□ -0.82
CMSS1-208ENST00000496116 HTR2CP28335 458 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 BIDP55957 195 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 SSBP1Q04837 148 aaKnown RBP9.91□□□□□ -0.82
CMSS1-208ENST00000496116 LINC00303Q3SY05 128 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 TMEM244Q5VVB8 128 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 SLC25A25Q6KCM7 469 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 LINC00346Q8IVM7 164 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 ADPRHL1Q8NDY3 354 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 OR10G3Q8NGC4 313 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 OR1J4Q8NGS1 313 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 ST7LQ8TDW4 575 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 PPP1R14AQ96A00 147 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 APMAPQ9HDC9 416 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 PISDQ9UG56 409 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 SCP2D1Q9UJQ7 156 aa9.91□□□□□ -0.82
CMSS1-208ENST00000496116 ANKRD34BA5PLL1 514 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 NDUFB6O95139 128 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 WNT11O96014 354 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 HPXP02790 462 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 FGF5P12034 268 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 CPN1P15169 458 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 PRSS3P35030 304 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 PTGDSP41222 190 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 CAPZA1P52907 286 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 GPR85P60893 370 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 PLA2G7Q13093 441 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 MYBPHQ13203 477 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 IL11RAQ14626 422 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 KIF26BQ2KJY2 2108 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 THEM4Q5T1C6 240 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 FAM166AQ6J272 317 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 MRPL14Q6P1L8 145 aaKnown RBP9.9□□□□□ -0.82
CMSS1-208ENST00000496116 KLHL24Q6TFL4 600 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 LYPD8Q6UX82 237 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 GLDNQ6ZMI3 551 aaPredicted RBP9.9□□□□□ -0.82
CMSS1-208ENST00000496116 HDDC2Q7Z4H3 204 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 UEVLDQ8IX04 471 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 MEIOBQ8N635 442 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 NKAIN3Q8N8D7 197 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 OR6M1Q8NGM8 313 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 IFI44Q8TCB0 444 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 PIGKQ92643 395 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 EDAQ92838 391 aa9.9□□□□□ -0.82
CMSS1-208ENST00000496116 SPACA9Q96E40 222 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms