RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 FER1L5A0AVI2 2057 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 SEC14L6B5MCN3 397 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 KLRC4-KLRK1H3BQV0 150 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 DLX3O60479 287 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 CYP4B1P13584 511 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 LIFP15018 202 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 TCN2P20062 427 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 CD22P20273 847 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 AGXTP21549 392 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 IL12BP29460 328 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 KIR2DL3P43628 341 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 HSF1Q00613 529 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 TLE3Q04726 772 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 ABHD18Q0P651 414 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 CEACAM7Q14002 265 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 RAB11BQ15907 218 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 RBBP7Q16576 425 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 DPY19L1Q2PZI1 675 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 SMIM21Q3B7S5 101 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 C6orf141Q5SZD1 244 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 TTC23Q5W5X9 447 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 CD276Q5ZPR3 534 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 TRIQKQ629K1 86 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 SERPINA12Q8IW75 414 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 MMP21Q8N119 569 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 FAM58AQ8N1B3 248 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 STEAP2Q8NFT2 490 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 OR1S1Q8NH92 325 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 PROKR1Q8TCW9 393 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 GHSRQ92847 366 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 MOCOSQ96EN8 888 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 THAP7Q9BT49 309 aaPredicted RBP10.48□□□□□ -0.73
BRCA1-222ENST00000493919 EFCAB11Q9BUY7 163 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 MECRQ9BV79 373 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 ELOVL1Q9BW60 279 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 MED28Q9H204 178 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 MIEF1Q9NQG6 463 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 PCTPQ9UKL6 214 aa10.48□□□□□ -0.73
BRCA1-222ENST00000493919 KCNE1BA0A087WTH5 132 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 A0A1W2PPV4 95 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 A0A1W2PQ09 198 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 FITM1A5D6W6 292 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 C9J4A7 227 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 DSCR3O14972 297 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 SOX15O60248 233 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 HPP00738 406 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 ARAFP10398 606 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 IL1RNP18510 177 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 TBPP20226 339 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 MAP2K3P46734 347 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 OR1D4P47884 311 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 SCAND1P57086 179 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 CDK6Q00534 326 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 PRTGQ2VWP7 1150 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 PLEKHN1Q494U1 663 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-222ENST00000493919 LCN10Q6JVE6 187 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 THSD4Q6ZMP0 1018 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 MRPL21Q7Z2W9 205 aaKnown RBP10.47□□□□□ -0.73
BRCA1-222ENST00000493919 C1QL4Q86Z23 238 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 OR52B6Q8NGF0 335 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 OR10W1Q8NGF6 305 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 ABHD3Q8WU67 409 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 FCGR1BQ92637 280 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 SMIM8Q96KF7 97 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 CDK15Q96Q40 435 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 ALKBH7Q9BT30 221 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-222ENST00000493919 SLC5A7Q9GZV3 580 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 C11orf54Q9H0W9 315 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-222ENST00000493919 PRO1933Q9H354 126 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 SMURF1Q9HCE7 757 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 MSL2Q9HCI7 577 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 RBFOX1Q9NWB1 397 aaKnown RBP10.47□□□□□ -0.73
BRCA1-222ENST00000493919 HAO2Q9NYQ3 351 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 V9GYS6 101 aa10.47□□□□□ -0.73
BRCA1-222ENST00000493919 A0A087WV48 116 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 TRAV34A0A0B4J273 112 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 A0A1B0GUH1 482 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 MYO1GB0I1T2 1018 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 TGFAP01135 160 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 ALDOCP09972 364 aaKnown RBP10.46□□□□□ -0.73
BRCA1-222ENST00000493919 GTF2F2P13984 249 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 EFNA1P20827 205 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-222ENST00000493919 PPT1P50897 306 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 ELLP55199 621 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-222ENST00000493919 RPS18P62269 152 aaKnown RBP10.46□□□□□ -0.73
BRCA1-222ENST00000493919 EMX1Q04741 257 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-222ENST00000493919 NDUFA9Q16795 377 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 TBCELQ5QJ74 424 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 SYT9Q86SS6 491 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 VRK2Q86Y07 508 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 OR2T11Q8NH01 316 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-222ENST00000493919 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 TMEM19Q96HH6 336 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 C4orf36Q96KX1 117 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 FCRL1Q96LA6 429 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 PRRC1Q96M27 445 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 PIGMQ9H3S5 423 aa10.46□□□□□ -0.73
BRCA1-222ENST00000493919 ZBTB26Q9HCK0 441 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms