RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 FCRL1Q96LA6 429 aa9.4□□□□□ -0.9
HDAC6-233ENST00000489352 DUSP26Q9BV47 211 aa9.4□□□□□ -0.9
HDAC6-233ENST00000489352 GSTO2Q9H4Y5 243 aa9.4□□□□□ -0.9
HDAC6-233ENST00000489352 ARMC7Q9H6L4 198 aa9.4□□□□□ -0.9
HDAC6-233ENST00000489352 TBCCD1Q9NVR7 557 aa9.4□□□□□ -0.9
HDAC6-233ENST00000489352 MKS1Q9NXB0 559 aa9.4□□□□□ -0.9
HDAC6-233ENST00000489352 FIS1Q9Y3D6 152 aa9.4□□□□□ -0.9
HDAC6-233ENST00000489352 TSSC4Q9Y5U2 329 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-233ENST00000489352 TRAV36DV7A0A075B6V5 113 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 LOC100509620A0A075B734 347 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 EXOC1LA0A1B0GW35 172 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 H0YHG0 523 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 ADAM20O43506 726 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 OR10H3O60404 316 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 LINC00032P0C843 101 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 PHBP35232 272 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 CHI3L1P36222 383 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-233ENST00000489352 MAGEA12P43365 314 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 C2orf54Q08AI8 447 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 FUT5Q11128 374 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 ZNF181Q2M3W8 571 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 KHDC1LQ5JSQ8 128 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 METAP1DQ6UB28 335 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-233ENST00000489352 WDR88Q6ZMY6 472 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 PXKQ7Z7A4 578 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 C10orf53Q8N6V4 93 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 SPC24Q8NBT2 197 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 NPEPL1Q8NDH3 523 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 C19orf18Q8NEA5 215 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 OR5AU1Q8NGC0 362 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 OR4A15Q8NGL6 344 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 OR11L1Q8NGX0 322 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 TMEM54Q969K7 222 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 COQ8BQ96D53 544 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 MAELQ96JY0 434 aaKnown RBP9.39□□□□□ -0.91
HDAC6-233ENST00000489352 C4orf45Q96LM5 186 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 TRNT1Q96Q11 434 aaKnown RBP9.39□□□□□ -0.91
HDAC6-233ENST00000489352 PRSS22Q9GZN4 317 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 PCDHAC1Q9H158 963 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 CACYBPQ9HB71 228 aaKnown RBP9.39□□□□□ -0.91
HDAC6-233ENST00000489352 SIRT7Q9NRC8 400 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 TMCC3Q9ULS5 477 aa9.39□□□□□ -0.91
HDAC6-233ENST00000489352 HUWE1Q7Z6Z7 4374 aaKnown RBP9.39□□□□□ -0.91
HDAC6-233ENST00000489352 TRBV23-1A0A0A0MS06 115 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 CDHR4A6H8M9 788 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 F2RL2O00254 374 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 LYPLA1O75608 230 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-233ENST00000489352 OR6A2O95222 327 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 ALDOBP05062 364 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 MMP7P09237 267 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-233ENST00000489352 PAICSP22234 425 aaKnown RBP9.38□□□□□ -0.91
HDAC6-233ENST00000489352 SERPINB9P50453 376 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 NAA20P61599 178 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 CD83Q01151 205 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 SYPL1Q16563 259 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 LRRC75BQ2VPJ9 315 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 LIN52Q52LA3 116 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 LRFN4Q6PJG9 635 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 LRRC74BQ6ZQY2 392 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 OR10AD1Q8NGE0 317 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 OR2T11Q8NH01 316 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 AKR7LQ8NHP1 331 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 CMBLQ96DG6 245 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 SLC38A1Q9H2H9 487 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 ZNF702PQ9H963 129 aa9.38□□□□□ -0.91
HDAC6-233ENST00000489352 A0A1B0GW55 424 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 C11orf98E9PRG8 122 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 LSM1O15116 133 aaKnown RBP9.37□□□□□ -0.91
HDAC6-233ENST00000489352 SLC25A17O43808 307 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 ABHD16AO95870 558 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 DUX4L2P0CJ85 424 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 DUX4L3P0CJ86 424 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 DUX4L5P0CJ88 424 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 DUX4L6P0CJ89 424 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 DUX4L7P0CJ90 424 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 NR2F1P10589 423 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 PRPS1L1P21108 318 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 KITLGP21583 273 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 TUBG1P23258 451 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 RGS6P49758 472 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 CLRN1P58418 232 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 GUCY1A3Q02108 690 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 PRB3Q04118 309 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-233ENST00000489352 ACSM1Q08AH1 577 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 PTGR1Q14914 329 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 PDCD4Q53EL6 469 aaKnown RBP9.37□□□□□ -0.91
HDAC6-233ENST00000489352 DUX4L9Q6RFH8 374 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-233ENST00000489352 LHFPL2Q6ZUX7 228 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 KRT77Q7Z794 578 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 CENPVQ7Z7K6 275 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-233ENST00000489352 NUDCD3Q8IVD9 361 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 CLECL1Q8IZS7 167 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 OR5AS1Q8N127 324 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 ANKFN1Q8N957 763 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 OR13G1Q8NGZ3 307 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 OR52P1PQ8NH57 321 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 OR6X1Q8NH79 312 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 ST8SIA4Q92187 359 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 PRR25Q96S07 402 aa9.37□□□□□ -0.91
HDAC6-233ENST00000489352 ZNF607Q96SK3 696 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms