RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 LY6G5BQ8NDX9 201 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 OR5L1Q8NGL2 311 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 OR4C3Q8NH37 302 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 CLHC1Q8NHS4 586 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SYNPRQ8TBG9 265 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 PNPT1Q8TCS8 783 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ABHD5Q8WTS1 349 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 RASD2Q96D21 266 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 C3orf30Q96M34 536 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 WDFY2Q96P53 400 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF607Q96SK3 696 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 DUSP26Q9BV47 211 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 NCOR1P1Q9H4R4 102 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 MEAF6Q9HAF1 191 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 RHOFQ9HBH0 211 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 CTPS2Q9NRF8 586 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF275Q9NSD4 429 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM38BQ9NVV0 291 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 HIF1ANQ9NWT6 349 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM216Q9P0N5 145 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 EIF3KQ9UBQ5 218 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 LEF1Q9UJU2 399 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 OSGIN1Q9UJX0 560 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC13A4Q9UKG4 626 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 MKLN1Q9UL63 735 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 CLEC4AQ9UMR7 237 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 WDR45Q9Y484 360 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 MGAQ8IWI9 3026 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 A0A087WUJ7 227 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 KIR2DS1A0A191URI9 304 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 IQCMA0A1B0GVH7 501 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ERICH4A6NGS2 130 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 DNAJC9-AS1A6NH13 148 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TRPC5OSA6NMA1 111 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 C12orf71A8MTZ7 269 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 VGLL3A8MV65 326 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 IQCF6A8MYZ5 107 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TRIM49D1C9J1S8 452 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ATP6V1G2-DDX39BF2Z307 99 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 KLF11O14901 512 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC22A2O15244 555 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PLPP2O43688 288 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 E2F6O75461 281 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 LRATO95237 230 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SLU7O95391 586 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 HMGN2P05204 90 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CHRM2P08172 466 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 MMP7P09237 267 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CXCR1P25024 350 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SHC1P29353 583 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CALCRP30988 508 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TGFBR2P37173 567 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PGGT1BP53609 377 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CDH13P55290 713 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PROK1P58294 105 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 LINC00310P59036 64 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 COPZ1P61923 177 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC25A3Q00325 362 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ROR2Q01974 943 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PLP2Q04941 152 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 AQP6Q13520 282 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CCNIQ14094 377 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CHI3L2Q15782 390 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 UAP1Q16222 522 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC36A3Q495N2 470 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TIGD2Q4W5G0 525 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TSPO2Q5TGU0 170 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 FAM27BQ5VT28 67 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TMEM154Q6P9G4 183 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF620Q6ZNG0 422 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PIGWQ7Z7B1 504 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 KRT73Q86Y46 540 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 UEVLDQ8IX04 471 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 IZUMO1Q8IYV9 350 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 RNF113BQ8IZP6 322 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PNLDC1Q8NA58 520 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 DEFB108BQ8NET1 73 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 CDS1Q92903 461 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 YIPF5Q969M3 257 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 RNFT2Q96EX2 444 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 C16orf58Q96GQ5 468 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 GPX7Q96SL4 187 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 FMO2Q99518 471 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ZBTB18Q99592 522 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 RTN4RQ9BZR6 473 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 TLNRD1Q9H1K6 362 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC38A1Q9H2H9 487 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 SIAEQ9HAT2 523 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 LIN7CQ9NUP9 197 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 FLRT3Q9NZU0 649 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 B3GAT1Q9P2W7 334 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 PURGQ9UJV8 347 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 RPS6KA6Q9UK32 745 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 BAG5Q9UL15 447 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF443Q9Y2A4 671 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 AUP1Q9Y679 476 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 NF1P21359 2839 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 FREM2Q5SZK8 3169 aa2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-203ENST00000488146 A0A087X0M5 115 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms