RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 AWAT1Q58HT5 328 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 FAM90A2PQ658T7 463 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 FAAP20Q6NZ36 180 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 HIST2H3AQ71DI3 136 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CPOQ8IVL8 374 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 THAP6Q8TBB0 222 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 C2CD4CQ8TF44 421 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 PPP1R1CQ8WVI7 109 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 MR1Q95460 341 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 UBE2E3Q969T4 207 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CNRIP1Q96F85 164 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 SHDQ96IW2 340 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 KIRREL1Q96J84 757 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CNTNAP3BQ96NU0 1288 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 SIGLEC12Q96PQ1 595 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CDC6Q99741 560 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 GPR61Q9BZJ8 451 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 FBXO44Q9H4M3 255 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 GPN1Q9HCN4 374 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 PRSS16Q9NQE7 514 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 SIDT1Q9NXL6 827 aaKnown RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 P2RX2Q9UBL9 471 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ZNF69Q9UC07 566 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 TCEAL9Q9UHQ7 104 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 SRPK3Q9UPE1 567 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ZNF281Q9Y2X9 895 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 MRPL42Q9Y6G3 142 aaKnown RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 TMEM14DPA8MWL7 114 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 RAB27BO00194 218 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 TOXO94900 526 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 TIAF1O95411 115 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 HPRT1P00492 218 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CHRM2P08172 466 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 SPARCP09486 303 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 AKAIN1P0CW23 69 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ATP1B2P14415 290 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 ST6GAL1P15907 406 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 GLIPR1P48060 266 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 GPR15P49685 360 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 SULT1A1P50225 295 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 RPL15P61313 204 aaKnown RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 FOXK1P85037 733 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 UNC119Q13432 240 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 RAB33AQ14088 237 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ARHGAP19Q14CB8 494 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 TOMM34Q15785 309 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 CPSF6Q16630 551 aaKnown RBP eCLIP3.66□□□□□ -1.82
USP16-205ENST00000474835 FAM98CQ17RN3 349 aaKnown RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 PIP5KL1Q5T9C9 394 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ZNF57Q68EA5 555 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 ZNF613Q6PF04 617 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 AGTRAPQ6RW13 159 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ZNF765Q7L2R6 523 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ABHD12BQ7Z5M8 362 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 SLC35E3Q7Z769 313 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 SPPL2AQ8TCT8 520 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 PAQR8Q8TEZ7 354 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ARL11Q969Q4 196 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 MS4A6EQ96DS6 147 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 FAM46AQ96IP4 442 aaKnown RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 OR14A2Q96R54 314 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 EFCAB11Q9BUY7 163 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 VN1R3Q9BXE9 311 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 C5orf66Q9H5L9 145 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 OR5AC2Q9NZP5 309 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CXXC1Q9P0U4 656 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 MLXQ9UH92 298 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 EDARQ9UNE0 448 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 WIF1Q9Y5W5 379 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ZFP37Q9Y6Q3 630 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 LOC400499M0QZD8 3231 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 LOC105371242A0A075B767 164 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 A0A1B0GVC2 190 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 A0A1W2PPH5 198 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 GSAPA4D1B5 854 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 A6NIN4 97 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 NDUFS8O00217 210 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CXCL11O14625 94 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 FLRT2O43155 660 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 FKTNO75072 461 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 DEDDO75618 318 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 HEXBP07686 556 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 OR5AC1P0C628 307 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 OR8U9P0C7N5 309 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ZNF286BP0CG31 522 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 LIPCP11150 499 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CCL1P22362 96 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 CERS1P27544 350 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 GLP1RP43220 463 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 RAB5CP51148 216 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 YPEL3P61236 119 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 ZNF506Q5JVG8 444 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 SFRP4Q6FHJ7 346 aaPredicted RBP3.66□□□□□ -1.82
USP16-205ENST00000474835 ZCCHC12Q6PEW1 402 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 ENPP7Q6UWV6 458 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 SERPINA13PQ6UXR4 307 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 TPRG1Q6ZUI0 275 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 TTC9BQ8N6N2 239 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 OR10H5Q8NGA6 315 aa3.66□□□□□ -1.82
USP16-205ENST00000474835 OR8U1Q8NH10 309 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms