RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 OFCC1Q8IZS5 231 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 LRRC75AQ8NAA5 344 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 NPEPL1Q8NDH3 523 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 MOSPD2Q8NHP6 518 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 IPCEF1Q8WWN9 437 aaPredicted RBP11.49□□□□□ -0.57
CHD3-209ENST00000473376 C4orf45Q96LM5 186 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 ANKRD19PQ9H560 264 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 LPAR2Q9HBW0 351 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 MAN2C1Q9NTJ4 1040 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 A4GNTQ9UNA3 340 aa11.49□□□□□ -0.57
CHD3-209ENST00000473376 IFNL4K9M1U5 179 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 MRASO14807 208 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 FSTL3O95633 263 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 FSHBP01225 129 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 TROVE2P10155 538 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD3-209ENST00000473376 TNFRSF1AP19438 455 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 GSTM3P21266 225 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 MSR1P21757 451 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 FPR2P25090 351 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 CDAP32320 146 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 PPP1CBP62140 327 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 PRKCDQ05655 676 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 KLF10Q13118 480 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 CDK5R2Q13319 367 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 TRAM2Q15035 370 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 TMEM155Q4W5P6 130 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 MTX3Q5HYI7 312 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 OR2T12Q8NG77 320 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 SLC25A40Q8TBP6 338 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 CCL17Q92583 94 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 POP5Q969H6 163 aaKnown RBP11.48□□□□□ -0.57
CHD3-209ENST00000473376 SAMD8Q96LT4 415 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 OR2J1Q9GZK6 312 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 NDEL1Q9GZM8 345 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 WNT5BQ9H1J7 359 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
CHD3-209ENST00000473376 ATPIF1Q9UII2 106 aa11.48□□□□□ -0.57
CHD3-209ENST00000473376 IGKV1D-43A0A0B4J1Z2 117 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 ELOVL7A1L3X0 281 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 NDUFAB1O14561 156 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 SURF4O15260 269 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 AVPP01185 164 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 IFI30P13284 250 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 KITLGP21583 273 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 CCNOP22674 350 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 TNFSF4P23510 183 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 LAP3P28838 519 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 OR1E2P47887 323 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 CTXN1P60606 82 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 ERVK-25P63136 954 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 FMODQ06828 376 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 SCRN3Q0VDG4 424 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 FHL1Q13642 323 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 TSTQ16762 297 aaKnown RBP11.47□□□□□ -0.57
CHD3-209ENST00000473376 AVPI1Q5T686 147 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 TMPRSS11FQ6ZWK6 438 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 OAFQ86UD1 273 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 MICU2Q8IYU8 434 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 SPICQ8N5J4 248 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 ZNF283Q8N7M2 679 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 ICA1LQ8NDH6 482 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 ABHD4Q8TB40 342 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 ACOT11Q8WXI4 607 aaPredicted RBP11.47□□□□□ -0.57
CHD3-209ENST00000473376 GCDHQ92947 438 aaPredicted RBP11.47□□□□□ -0.57
CHD3-209ENST00000473376 GAL3ST1Q99999 423 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 TMEM120AQ9BXJ8 343 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 OR51B6Q9H340 312 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 SAR1AQ9NR31 198 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 POLE4Q9NR33 117 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 ARGLU1Q9NWB6 273 aaPredicted RBP11.47□□□□□ -0.57
CHD3-209ENST00000473376 NPTNQ9Y639 398 aa11.47□□□□□ -0.57
CHD3-209ENST00000473376 LOC105371242A0A075B767 164 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 ZSCAN5BA6NJL1 495 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 SPRY3O43610 288 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 IFNW1P05000 195 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 PPIAL4GP0DN37 164 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 MAKP20794 623 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 MPV17P39210 176 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 LSM6P62312 80 aaKnown RBP11.46□□□□□ -0.57
CHD3-209ENST00000473376 ACTG1P63261 375 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 ENDOGQ14249 297 aaKnown RBP11.46□□□□□ -0.57
CHD3-209ENST00000473376 RFPL4BQ6ZWI9 263 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 C3orf56Q8N813 242 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 AKR7LQ8NHP1 331 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 ST7LQ8TDW4 575 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 GEMIN6Q8WXD5 167 aaKnown RBP11.46□□□□□ -0.57
CHD3-209ENST00000473376 NSMAFQ92636 917 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 THOC1Q96FV9 657 aaKnown RBP11.46□□□□□ -0.57
CHD3-209ENST00000473376 DCLRE1CQ96SD1 692 aaKnown RBP11.46□□□□□ -0.57
CHD3-209ENST00000473376 FNDC11Q9BVV2 318 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 C7orf69Q9H7B7 122 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 IL19Q9UHD0 177 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 OPN4Q9UHM6 478 aa11.46□□□□□ -0.57
CHD3-209ENST00000473376 A8MXK9 166 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 EFCAB9A8MZ26 197 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 ABHD16AO95870 558 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 NGFP01138 241 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 IGHV2-70P01814 119 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 CD14P08571 375 aa11.45□□□□□ -0.58
CHD3-209ENST00000473376 TNFRSF1BP20333 461 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms