RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CD2P06729 351 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ZNF735P0CB33 412 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ABCD3P28288 659 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 HTR2CP28335 458 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ADAM8P78325 824 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ZP2Q05996 745 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 SRSF4Q08170 494 aaKnown RBP12.26□□□□□ -0.45
BRCA1-209ENST00000470026 PLCXD2Q0VAA5 305 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 C1orf100Q5SVJ3 147 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 OTPQ5XKR4 325 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 OVCH2Q7RTZ1 564 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 OR6M1Q8NGM8 313 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 SLC25A36Q96CQ1 311 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ZDHHC12Q96GR4 267 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 TBL1XR1Q9BZK7 514 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 TAS2R4Q9NYW5 299 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 MRPS18BQ9Y676 258 aaKnown RBP12.26□□□□□ -0.45
BRCA1-209ENST00000470026 R4GMQ9 66 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 PCNX3Q9H6A9 2034 aa12.26□□□□□ -0.45
BRCA1-209ENST00000470026 ALPK2Q86TB3 2170 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 CDC14CA4D256 554 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 OR6C76A6NM76 312 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 A8MXK9 166 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 BET1O15155 118 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 PLGP00747 810 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-209ENST00000470026 HOXD4P09016 255 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-209ENST00000470026 CRABP1P29762 137 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 EIF2B1Q14232 305 aaKnown RBP12.25□□□□□ -0.45
BRCA1-209ENST00000470026 UBXN2BQ14CS0 331 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 POMZP3Q6PJE2 187 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 CARFQ8N187 725 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 SMRP1Q8NCR6 262 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 OR1N1Q8NGS0 311 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 OR6K3Q8NGY3 331 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 DAZLQ92904 295 aaKnown RBP12.25□□□□□ -0.45
BRCA1-209ENST00000470026 FOXN4Q96NZ1 517 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 ZNF587Q96SQ5 575 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-209ENST00000470026 POTEKPQ9BYX7 375 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 EXO5Q9H790 373 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 G6PC2Q9NQR9 355 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 SLC2A4RGQ9NR83 387 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 MED11Q9P086 117 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 UPB1Q9UBR1 384 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 CKLFQ9UBR5 152 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 IGHV1OR15-9A0A0B4J2B8 117 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 RFPL4AA6NLU0 287 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 RFPL4AL1F8VTS6 287 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 GMFGO60234 142 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 ACHEP22303 614 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 MPGP29372 298 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 SLC26A5P58743 744 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 UBE2MP61081 183 aaKnown RBP12.25□□□□□ -0.45
BRCA1-209ENST00000470026 TAGLNQ01995 201 aaKnown RBP12.25□□□□□ -0.45
BRCA1-209ENST00000470026 GLO1Q04760 184 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 ZP4Q12836 540 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 LY6G6FQ5SQ64 297 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 GLYATL3Q5SZD4 288 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 HLA-DQA1Q5Y7H0 255 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 GSG1LQ6UXU4 331 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 MDGA2Q7Z553 956 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 ADGRE4PQ86SQ3 457 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 GALNT11Q8NCW6 608 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 CCDC107Q8WV48 283 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 TNFAIP8L1Q8WVP5 186 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 DVL3Q92997 716 aaPredicted RBP12.25□□□□□ -0.45
BRCA1-209ENST00000470026 CXorf58Q96LI9 332 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 HHLA2Q9UM44 414 aa12.25□□□□□ -0.45
BRCA1-209ENST00000470026 FXYD6-FXYD2A0A087WZ82 144 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 XIRP2A4UGR9 3374 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 MEIS3P1A6NDR6 274 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 OR2T1O43869 369 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 RAD1O60671 282 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 RAB3DO95716 219 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 OR4E1P0C645 316 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 ARRB1P49407 418 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-209ENST00000470026 GMFBP60983 142 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 OC90Q02509 493 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-209ENST00000470026 TDGQ13569 410 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 GK2Q14410 553 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-209ENST00000470026 ZNF660Q6AZW8 331 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-209ENST00000470026 DEGS2Q6QHC5 323 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 TMEM205Q6UW68 189 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 SYT13Q7L8C5 426 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 EIF4E3Q8N5X7 224 aaKnown RBP12.24□□□□□ -0.45
BRCA1-209ENST00000470026 SLC26A10Q8NG04 563 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 DNAJA3Q96EY1 480 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 SLC25A44Q96H78 314 aaPredicted RBP12.24□□□□□ -0.45
BRCA1-209ENST00000470026 ARL6Q9H0F7 186 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 FXYD6Q9H0Q3 95 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 PPA2Q9H2U2 334 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 POFUT1Q9H488 388 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 DHCR7Q9UBM7 475 aaKnown RBP12.24□□□□□ -0.45
BRCA1-209ENST00000470026 KNL1Q8NG31 2342 aa12.24□□□□□ -0.45
BRCA1-209ENST00000470026 TRAV14DV4A0A0A6YYC5 116 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 A0A1B0GTI1 187 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 TMEM82A0PJX8 343 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 NPIPB13A6NJU9 1138 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 NPIPB4C9JG80 1138 aa12.23□□□□□ -0.45
BRCA1-209ENST00000470026 NUDT21O43809 227 aaKnown RBP12.23□□□□□ -0.45
BRCA1-209ENST00000470026 AHSA1O95433 338 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms