RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ENTPD1P49961 510 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 B3GALT5-AS1P59052 145 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 ROR2Q01974 943 aaKnown RBP5.48□□□□□ -1.53
PTCD3-208ENST00000469585 FUT5Q11128 374 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 ST3GAL3Q11203 375 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 BNIP2Q12982 314 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 TMEM44Q2T9K0 475 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 DNAL1Q4LDG9 190 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 IFI44LQ53G44 452 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 OTUD3Q5T2D3 398 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-208ENST00000469585 C1orf140Q5VVS0 124 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 AP1ARQ63HQ0 302 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CGB2Q6NT52 195 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 PAQR6Q6TCH4 344 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CLEC18BQ6UXF7 455 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CASP12Q6UXS9 341 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 PGAM4Q8N0Y7 254 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 LSMEM1Q8N8F7 131 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 C9orf106Q8NAJ2 232 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CLEC18CQ8NCF0 446 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 STEAP2Q8NFT2 490 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 RNF128Q8TEB7 428 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 FAM222BQ8WU58 562 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 NSL1Q96IY1 281 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 NSMCE2Q96MF7 247 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 SF3B5Q9BWJ5 86 aaKnown RBP5.48□□□□□ -1.53
PTCD3-208ENST00000469585 RTN4RQ9BZR6 473 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 SLC19A3Q9BZV2 496 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 RBM38Q9H0Z9 239 aaKnown RBP5.48□□□□□ -1.53
PTCD3-208ENST00000469585 YY1AP1Q9H869 796 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 CYSLTR2Q9NS75 346 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 STX18Q9P2W9 335 aaKnown RBP5.48□□□□□ -1.53
PTCD3-208ENST00000469585 OSGIN1Q9UJX0 560 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF407Q9C0G0 2248 aa5.48□□□□□ -1.53
PTCD3-208ENST00000469585 PHF3Q92576 2039 aaKnown RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 A0A1B0GWA3 101 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 A0A1W2PRG6 482 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CLDN24A6NM45 220 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF726A6NNF4 738 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF724A8MTY0 619 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 GYG2O15488 501 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CYTIPO60759 359 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 SS18L1O75177 396 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 MFN2O95140 757 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 SCGB1D1O95968 90 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 LGI1O95970 557 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 THRBP10828 461 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 TCN1P20061 433 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 AHCYP23526 432 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 AGTR1P30556 359 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 KDELR2P33947 212 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CD79BP40259 229 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 RBM34P42696 430 aaKnown RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 RPS5P46782 204 aaKnown RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 ZNF136P52737 540 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 SUCLG1P53597 346 aaKnown RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 SELENOWP63302 87 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 FOXD4Q12950 439 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 PMS2P3Q13401 168 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CEACAM7Q14002 265 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 P2RY6Q15077 328 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 PDK3Q15120 406 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 OR1Q1Q15612 314 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 TOMM34Q15785 309 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CYBRD1Q53TN4 286 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 AWAT2Q6E213 333 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 RTL6Q6ICC9 239 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 OR7E24Q6IFN5 339 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CCDC80Q76M96 950 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 OLIG3Q7RTU3 272 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 TRPM8Q7Z2W7 1104 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 PIGWQ7Z7B1 504 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CARM1Q86X55 608 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CHERPQ8IWX8 916 aaKnown RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 MSRB3Q8IXL7 192 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 DEFB107AQ8IZN7 70 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CLIP4Q8N3C7 705 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 GPR137CQ8N3F9 429 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 MARVELD2Q8N4S9 558 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 POMGNT2Q8NAT1 580 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 TMEM116Q8NCL8 245 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 MFSD8Q8NHS3 518 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 ADAMTS16Q8TE57 1224 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 ROBO4Q8WZ75 1007 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 OTULINQ96BN8 352 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 DACH2Q96NX9 599 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 CHCHD6Q9BRQ6 235 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 UCK2Q9BZX2 261 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 NANSQ9NR45 359 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 IL36RNQ9UBH0 155 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 TMCC3Q9ULS5 477 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 SLC7A7Q9UM01 511 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 PRPF19Q9UMS4 504 aaKnown RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 B3GALT5Q9Y2C3 310 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 MED31Q9Y3C7 131 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 MAGED1Q9Y5V3 778 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-208ENST00000469585 POLEQ07864 2286 aa5.47□□□□□ -1.53
PTCD3-208ENST00000469585 PRRC2CQ9Y520 2896 aaKnown RBP5.46□□□□□ -1.53
PTCD3-208ENST00000469585 IGHV3-15A0A0B4J1V0 119 aa5.46□□□□□ -1.54
PTCD3-208ENST00000469585 TMEM72A0PK05 275 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms