RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CHRNGP07510 517 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 ADORA3P0DMS8 318 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 CPA3P15088 417 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF32P17041 273 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 HOXD3P31249 432 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-203ENST00000467533 RPL4P36578 427 aaKnown RBP8.42□□□□□ -1.06
HDAC3-203ENST00000467533 KIR2DS4P43632 304 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 CLRN1P58418 232 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 ARF6P62330 175 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 TXNL4AP83876 142 aaKnown RBP8.42□□□□□ -1.06
HDAC3-203ENST00000467533 SLC7A5Q01650 507 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 CCDC153Q494R4 210 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 ALG10BQ5I7T1 473 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 RPS26P11Q5JNZ5 115 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-203ENST00000467533 CEP85LQ5SZL2 805 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF841Q6ZN19 808 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 RNF144BQ7Z419 303 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 MOGAT3Q86VF5 341 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 ATG16L2Q8NAA4 619 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 OR10AD1Q8NGE0 317 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 OR6S1Q8NH40 331 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 PPP1R35Q8TAP8 253 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 TUBGCP3Q96CW5 907 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 SLC25A44Q96H78 314 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-203ENST00000467533 MEGF10Q96KG7 1140 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 MOGAT1Q96PD6 335 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 MKS1Q9NXB0 559 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 CALML5Q9NZT1 146 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF232Q9UNY5 417 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 SACSQ9NZJ4 4579 aa8.42□□□□□ -1.06
HDAC3-203ENST00000467533 A0A1B0GWA3 101 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 PLIN3O60664 434 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 PGA4P0DJD7 388 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 PGA3P0DJD8 388 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 PF4V1P10720 104 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 IRF2P14316 349 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 GCAP28676 217 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 CRISP3P54108 245 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 MAD2L1Q13257 205 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-203ENST00000467533 UGT3A2Q3SY77 523 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 PDCD4Q53EL6 469 aaKnown RBP8.41□□□□□ -1.06
HDAC3-203ENST00000467533 ARL9Q6T311 187 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 MEPCEQ7L2J0 689 aaKnown RBP8.41□□□□□ -1.06
HDAC3-203ENST00000467533 VMO1Q7Z5L0 202 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 CALHM3Q86XJ0 350 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 TRIML2Q8N7C3 387 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 NPEPL1Q8NDH3 523 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 C19orf18Q8NEA5 215 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 WFDC9Q8NEX5 89 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 DPF1Q92782 380 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 C4orf45Q96LM5 186 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 CITED2Q99967 270 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-203ENST00000467533 POFUT1Q9H488 388 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 RANBP3Q9H6Z4 567 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-203ENST00000467533 PALMDQ9NP74 551 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 SELENONQ9NZV5 590 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 ERVK-18Q9QC07 812 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 CHST2Q9Y4C5 530 aa8.41□□□□□ -1.06
HDAC3-203ENST00000467533 A0A1W2PRD5 423 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 A0A1W2PRF3 423 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 A0A1W2PRM7 423 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 A0A1W2PRX2 142 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 ELOVL7A1L3X0 281 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 ADARB2-AS1A8MUL3 147 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 H3BUX3 64 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 RNF13O43567 381 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 ICMTO60725 284 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 FSTL3O95633 263 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 ABHD16AO95870 558 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 IGHG1P01857 330 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 PF4P02776 101 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 FGF4P08620 206 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 KITLGP21583 273 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 PSMB10P40306 273 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 SRP9P49458 86 aaKnown RBP8.4□□□□□ -1.06
HDAC3-203ENST00000467533 ERVK-25P63136 954 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 PSG4Q00888 419 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 CASP8Q14790 479 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 MAPK11Q15759 364 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 LY6EQ16553 131 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 NUDCD3Q8IVD9 361 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 C10orf107Q8IVU9 208 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 OR5AS1Q8N127 324 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 NOXO1Q8NFA2 376 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 OR5J2Q8NH18 312 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 NPRL2Q8WTW4 380 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 DNAJA4Q8WW22 397 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-203ENST00000467533 MCHR2Q969V1 340 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 RCC1LQ96I51 464 aaKnown RBP8.4□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF347Q96SE7 839 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 ZNF607Q96SK3 696 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 CTSZQ9UBR2 303 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 TMCC3Q9ULS5 477 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 IFT52Q9Y366 437 aa8.4□□□□□ -1.06
HDAC3-203ENST00000467533 LYSTQ99698 3801 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 STAB2Q8WWQ8 2551 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 A0A1B0GVI7 797 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 CCDC154A6NI56 674 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 DUS4LO95620 317 aaKnown RBP8.39□□□□□ -1.07
HDAC3-203ENST00000467533 EEF1B2P24534 225 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms