RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 CYLC2Q14093 348 aaPredicted RBP17.4■□□□□ 0.38
COL6A1-203ENST00000466285 ZNF718Q3SXZ3 478 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 NRMQ8IXM6 262 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 DEFB108BQ8NET1 73 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 OR51A7Q8NH64 312 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 TAF15Q92804 592 aaKnown RBP eCLIP17.4■□□□□ 0.38
COL6A1-203ENST00000466285 GCDHQ92947 438 aaPredicted RBP17.4■□□□□ 0.38
COL6A1-203ENST00000466285 DVL3Q92997 716 aaPredicted RBP17.4■□□□□ 0.38
COL6A1-203ENST00000466285 BPIFA2Q96DR5 249 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 TPD52L3Q96J77 140 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 PRRC1Q96M27 445 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 ECSITQ9BQ95 431 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 KLHL21Q9UJP4 597 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 ADAM18Q9Y3Q7 739 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 PPIAL4AQ9Y536 164 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 CMYA5Q8N3K9 4069 aa17.4■□□□□ 0.38
COL6A1-203ENST00000466285 FAM220BPB1ANY3 271 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 SPRY1O43609 319 aaPredicted RBP17.39■□□□□ 0.37
COL6A1-203ENST00000466285 ICMTO60725 284 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 SASH3O75995 380 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 PRSS23O95084 383 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 IGHV2-70P01814 119 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 ADH4P08319 380 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 CST2P09228 141 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 TEKQ02763 1124 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 DBPQ10586 325 aaPredicted RBP17.39■□□□□ 0.37
COL6A1-203ENST00000466285 PSG7Q13046 419 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 MMEL1Q495T6 779 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 AWAT1Q58HT5 328 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 HDXQ7Z353 690 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 HDDC2Q7Z4H3 204 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 SLC7A6Q92536 515 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 RAB1CQ92928 201 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 C1orf147Q96MC9 270 aaPredicted RBP17.39■□□□□ 0.37
COL6A1-203ENST00000466285 DUX5Q96PT3 197 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 DCLRE1CQ96SD1 692 aaKnown RBP17.39■□□□□ 0.37
COL6A1-203ENST00000466285 ALG12Q9BV10 488 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 POLR2J2Q9GZM3 115 aaKnown RBP17.39■□□□□ 0.37
COL6A1-203ENST00000466285 POLR2J3Q9H1A7 115 aaKnown RBP17.39■□□□□ 0.37
COL6A1-203ENST00000466285 C7orf69Q9H7B7 122 aa17.39■□□□□ 0.37
COL6A1-203ENST00000466285 HMGB1P1B2RPK0 211 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-203ENST00000466285 TRIM77I1YAP6 450 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 CDC42EP2O14613 210 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 KDELR2P33947 212 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 GPR4P46093 362 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 UBA52P62987 128 aaKnown RBP17.38■□□□□ 0.37
COL6A1-203ENST00000466285 TAF11Q15544 211 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 MESTQ5EB52 335 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 KLF17Q5JT82 389 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-203ENST00000466285 BCL6BQ8N143 479 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-203ENST00000466285 TIMD4Q96H15 378 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 SIGLEC11Q96RL6 698 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 KCNN2Q9H2S1 579 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 SAR1AQ9NR31 198 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 POLE4Q9NR33 117 aa17.38■□□□□ 0.37
COL6A1-203ENST00000466285 SOX21Q9Y651 276 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-203ENST00000466285 PLSCR5A0PG75 271 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 TRAPPC2LH3BP13 241 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 J3QLI3 93 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 MT-ND5P03915 603 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 CD55P08174 381 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 THRBP10828 461 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 ANPEPP15144 967 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 TUSC1Q2TAM9 212 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 TBPL2Q6SJ96 375 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 TSEN54Q7Z6J9 526 aaKnown RBP17.37■□□□□ 0.37
COL6A1-203ENST00000466285 SIGLECL1Q8N7X8 197 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 C3orf56Q8N813 242 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 C4orf45Q96LM5 186 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 ZNF48Q96MX3 618 aaPredicted RBP17.37■□□□□ 0.37
COL6A1-203ENST00000466285 CMTM6Q9NX76 183 aa17.37■□□□□ 0.37
COL6A1-203ENST00000466285 EIF3KQ9UBQ5 218 aaKnown RBP17.37■□□□□ 0.37
COL6A1-203ENST00000466285 LOC100653049A0A140TA62 436 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 KCNAB3O43448 404 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 KRT34O76011 436 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 MSR1P21757 451 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 TNFAIP6P98066 277 aaPredicted RBP17.36■□□□□ 0.37
COL6A1-203ENST00000466285 ZMYND11Q15326 602 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 OFCC1Q8IZS5 231 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 BPIFB2Q8N4F0 458 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 POU5F2Q8N7G0 328 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 Q96M85 177 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 RBM4Q9BWF3 364 aaKnown RBP17.36■□□□□ 0.37
COL6A1-203ENST00000466285 SUCNR1Q9BXA5 334 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 STX18Q9P2W9 335 aaKnown RBP17.36■□□□□ 0.37
COL6A1-203ENST00000466285 NPTNQ9Y639 398 aa17.36■□□□□ 0.37
COL6A1-203ENST00000466285 TIMM8AO60220 97 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-203ENST00000466285 CTLA4P16410 223 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 CDK5R2Q13319 367 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 MTX3Q5HYI7 312 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 COQ5Q5HYK3 327 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 METTL21CQ5VZV1 264 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 ERICH5Q6P6B1 374 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 OR2T12Q8NG77 320 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 NANPQ8TBE9 248 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 ITLN1Q8WWA0 313 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 RCN3Q96D15 328 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 TMEM106BQ9NUM4 274 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 FGFR1OP2Q9NVK5 253 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms