RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 PEF1Q9UBV8 284 aaKnown RBP3.54□□□□□ -1.84
UBR4-209ENST00000465036 TAC3Q9UHF0 121 aa3.54□□□□□ -1.84
UBR4-209ENST00000465036 ZNF346Q9UL40 294 aaKnown RBP3.54□□□□□ -1.84
UBR4-209ENST00000465036 PDE10AQ9Y233 779 aa3.54□□□□□ -1.84
UBR4-209ENST00000465036 PIGLQ9Y2B2 252 aa3.54□□□□□ -1.84
UBR4-209ENST00000465036 FER1L5A0AVI2 2057 aa3.54□□□□□ -1.84
UBR4-209ENST00000465036 TEX13DA0A0J9YY54 714 aaPredicted RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 ARGFXA6NJG6 315 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 FAM159BA6NKW6 160 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 E7EQ34 232 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 H0YGG7 62 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 HAT1O14929 419 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 ARPC1BO15143 372 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 PFDN6O15212 129 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 ALOX12BO75342 701 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 ZNF254O75437 659 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 TRMUO75648 421 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 KLF7O75840 302 aaPredicted RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 NDUFA7O95182 113 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 ANP32DO95626 131 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 NGFP01138 241 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 KRT6AP02538 564 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CATP04040 527 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 RPN2P04844 631 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 PRKACAP17612 351 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 NT5EP21589 574 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CBLP22681 906 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CEACAM8P31997 349 aaPredicted RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 RPA3P35244 121 aaPredicted RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 ALDH3B1P43353 468 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 OR1D4P47884 311 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 EFNA3P52797 238 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CLDN17P56750 224 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 VSX2P58304 361 aaPredicted RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 TAS2R39P59534 338 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 TBPL1P62380 186 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 GUCY2DQ02846 1103 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 PRDX1Q06830 199 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 TRAP1Q12931 704 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 CALCOCO2Q13137 446 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SYPL1Q16563 259 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 PPP1R3AQ16821 1122 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 WHAMMP3Q1A5X7 153 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 TMEM44Q2T9K0 475 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 TTLL9Q3SXZ7 439 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 WLSQ5T9L3 541 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 AGBL2Q5U5Z8 902 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 MLIPQ5VWP3 458 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 RAET1LQ5VY80 246 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 FAM219BQ5XKK7 198 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 RHBDD2Q6NTF9 364 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 C8orf74Q6P047 294 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 TTC23LQ6PF05 361 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 AGTRAPQ6RW13 159 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SBSNQ6UWP8 590 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SHISA6Q6ZSJ9 500 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 C3orf62Q6ZUJ4 267 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 PRSS41Q7RTY9 318 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 GOLGA7Q7Z5G4 137 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 VN1R4Q7Z5H5 301 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CMC1Q7Z7K0 106 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 LRRTM1Q86UE6 522 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CTAGE3PQ8IX95 158 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CDK20Q8IZL9 346 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SLC38A6Q8IZM9 456 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 FAM9CQ8IZT9 166 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 TMEM123Q8N131 208 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 ZNF843Q8N446 348 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 MMGT1Q8N4V1 131 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 TRIML2Q8N7C3 387 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SYT14Q8NB59 555 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 ZNF740Q8NDX6 193 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SMPDL3AQ92484 453 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 MED8Q96G25 268 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 C10orf90Q96M02 699 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 FOPNLQ96NB1 174 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 ZNF285Q96NJ3 590 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 PRAP1Q96NZ9 151 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 OR2A5Q96R48 311 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 OR4K3Q96R72 315 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 S1PR3Q99500 378 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SELENOSQ9BQE4 189 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 NAT9Q9BTE0 207 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CHRNA10Q9GZZ6 450 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 DNTTIP1Q9H147 329 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SPNS1Q9H2V7 528 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 KAT8Q9H7Z6 458 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 GEMIN7Q9H840 131 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 LPAR2Q9HBW0 351 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 MRPS30Q9NP92 439 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 ZNF701Q9NV72 531 aaPredicted RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 TAS2R13Q9NYV9 303 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 FLRT3Q9NZU0 649 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 PIPOXQ9P0Z9 390 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 CTSFQ9UBX1 484 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 MIOXQ9UGB7 285 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 UTP11Q9Y3A2 253 aaKnown RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 KLF2Q9Y5W3 355 aaPredicted RBP3.53□□□□□ -1.84
UBR4-209ENST00000465036 SEC16AO15027 2179 aa3.53□□□□□ -1.84
UBR4-209ENST00000465036 SPTA1P02549 2419 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms