RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ANKRD16Q6P6B7 361 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 KLHL24Q6TFL4 600 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 PRSS48Q7RTY5 328 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 DPY19L4Q7Z388 723 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 LUZP2Q86TE4 346 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF433Q8N7K0 673 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 C1orf162Q8NEQ5 155 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 OR2T27Q8NH04 317 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 OTOSQ8NHW6 89 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 SMAP2Q8WU79 429 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 ASB5Q8WWX0 329 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 DGCR14Q96DF8 476 aaKnown RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF416Q9BWM5 594 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 COQ3Q9NZJ6 369 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 CYB5R1Q9UHQ9 305 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 ALPK2Q86TB3 2170 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 C12orf71A8MTZ7 269 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 CST2P09228 141 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 SPARCP09486 303 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 EEF1B2P24534 225 aaKnown RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 C21orf33P30042 268 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 RPS27P42677 84 aaKnown RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 PIGFQ07326 219 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 RNLSQ5VYX0 342 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 CXorf67Q86X51 503 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 ACBD7Q8N6N7 88 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 OR10H4Q8NGA5 316 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 BCL2L2Q92843 193 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 TMEM165Q9HC07 324 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 INPP5EQ9NRR6 644 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 ERRFI1Q9UJM3 462 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-203ENST00000449049 COPS3Q9UNS2 423 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 LHFPL6Q9Y693 200 aa12.32□□□□□ -0.44
SHMT2-203ENST00000449049 LYZL6O75951 148 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 FARS2O95363 451 aaKnown RBP12.31□□□□□ -0.44
SHMT2-203ENST00000449049 HCCSP53701 268 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 GABRA6Q16445 453 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 SLC25A35Q3KQZ1 300 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 SFRP5Q5T4F7 317 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 SLC18B1Q6NT16 456 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 SKA3Q8IX90 412 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 LRRC18Q8N456 261 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF454Q8N9F8 522 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF649Q9BS31 505 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 WACQ9BTA9 647 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 CDCA4Q9BXL8 241 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 GALNT8Q9NY28 637 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF224Q9NZL3 707 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 KLHDC2Q9Y2U9 406 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 EXOSC1Q9Y3B2 195 aaKnown RBP12.31□□□□□ -0.44
SHMT2-203ENST00000449049 TMEM14AQ9Y6G1 99 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 PRRC2CQ9Y520 2896 aaKnown RBP12.31□□□□□ -0.44
SHMT2-203ENST00000449049 EPG5Q9HCE0 2579 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 A0A1W2PQL4 384 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-203ENST00000449049 TMCC2O75069 709 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 MT-ND2P03891 347 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ALOX5APP20292 161 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 CDH15P55291 814 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF85Q03923 595 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 AQP6Q13520 282 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 IRF3Q14653 427 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF773Q6PK81 442 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 SYT9Q86SS6 491 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 RFLNBQ8N5W9 214 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 FBXO17Q96EF6 278 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 CDADC1Q9BWV3 514 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ERVK13-1Q9NX77 482 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 ASH2LQ9UBL3 628 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 RALYQ9UKM9 306 aaKnown RBP12.31□□□□□ -0.44
SHMT2-203ENST00000449049 POLR1DQ9Y2S0 133 aa12.31□□□□□ -0.44
SHMT2-203ENST00000449049 FREM1Q5H8C1 2179 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 NCOA6Q14686 2063 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-203ENST00000449049 A0A096LPE4 126 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 A0A1W2PPZ6 126 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 DAPL1A0PJW8 107 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 ZNF670-ZNF695F2Z2N8 137 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 PHYHO14832 338 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 ATP6V1G1O75348 118 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 RAD51DO75771 328 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 LIMS3P0CW19 117 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 LIMS4P0CW20 117 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 PSMB1P20618 241 aaKnown RBP12.3□□□□□ -0.44
SHMT2-203ENST00000449049 HIST1H3AP68431 136 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 TBRG1Q3YBR2 411 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 HIST2H3PS2Q5TEC6 136 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 OR7E24Q6IFN5 339 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 STAC2Q6ZMT1 411 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 HIST2H3AQ71DI3 136 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 SATL1Q86VE3 508 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 LINC00346Q8IVM7 164 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 C17orf78Q8N4C9 275 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 TSPAN14Q8NG11 270 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 LILRB4Q8NHJ6 448 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 ST7LQ8TDW4 575 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 TBX5Q99593 518 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 PTTG2Q9NZH5 202 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 LAMP5Q9UJQ1 280 aa12.3□□□□□ -0.44
SHMT2-203ENST00000449049 GDF2Q9UK05 429 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms