RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 DMRTA2Q96SC8 542 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 P2RX7Q99572 595 aaKnown RBP8.27□□□□□ -1.09
NIPBL-202ENST00000448238 HES7Q9BYE0 225 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM9BQ9NQ34 198 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 FKBP11Q9NYL4 201 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 CCDC187A0A096LP49 1063 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF860A6NHJ4 632 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 HSD17B6O14756 317 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF324O75467 553 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-202ENST00000448238 TCN2P20062 427 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 RRADP55042 308 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 GP2P55259 537 aaKnown RBP8.27□□□□□ -1.09
NIPBL-202ENST00000448238 RPEL1Q2QD12 228 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 HUS1BQ8NHY5 278 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM163Q8TC26 289 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 OR2D2Q9H210 308 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 NOX4Q9NPH5 578 aa8.27□□□□□ -1.09
NIPBL-202ENST00000448238 FBLL1A6NHQ2 334 aaKnown RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 SLC5A2P31639 672 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 GPR85P60893 370 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 C19orf57Q0VDD7 668 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 CPZQ66K79 652 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 ZFP30Q9Y2G7 519 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 USP3Q9Y6I4 520 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 SETD1AO15047 1707 aaKnown RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 POU2F2P09086 479 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 SMIM6P0DI80 62 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OPRD1P41143 372 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 GDF6Q6KF10 455 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 VHLLQ6RSH7 139 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 LBX2Q6XYB7 198 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 CYHR1Q6ZMK1 362 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 NRARPQ7Z6K4 114 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 SLCO4A1Q96BD0 722 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 MOB3AQ96BX8 217 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 LOC107984156A0A0G2JMH3 177 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 SMIM28A0A1B0GU29 152 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 A0A1W2PNV4 684 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM150BA6NC51 233 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 IDUAP35475 653 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OR1D4P47884 311 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OR1D5P58170 312 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 PLK5Q496M5 336 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 PSAPL1Q6NUJ1 521 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 LCN15Q6UWW0 184 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 ARL17AQ8IVW1 177 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 NAXDQ8IW45 347 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OR6M1Q8NGM8 313 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 IL37Q9NZH6 218 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 A0A1W2PPC4 97 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 HPP00738 406 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 GYPAP02724 150 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OPN1MWP04001 364 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OPN1MW2P0DN77 364 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OPN1MW3P0DN78 364 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 CALHM3Q86XJ0 350 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 DND1Q8IYX4 353 aaKnown RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 METTL27Q8N6F8 245 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 KRTCAP2Q8N6L1 136 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 TAAR9Q96RI9 348 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 SEBOXQ9HB31 216 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 DNAJC15Q9Y5T4 150 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 SLC5A10A0PJK1 596 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 EIF1BO60739 113 aaKnown RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF25P17030 456 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 MTNR1BP49286 362 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 PKIAP61925 76 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 MFAP5Q13361 173 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 MARCH8Q5T0T0 291 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 EMC10Q5UCC4 262 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 IGDCC3Q8IVU1 814 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 KLHDC8AQ8IYD2 350 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OR2L13Q8N349 312 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 CYB561A3Q8NBI2 242 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 NEIL1Q96FI4 390 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OR2A14Q96R47 310 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 TMEM147Q9BVK8 224 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 FLVCR1Q9Y5Y0 555 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 SH2D1BO14796 132 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 RRP8O43159 456 aaKnown RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 CCR9P51686 369 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 YBX1P67809 324 aaKnown RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 MAT1AQ00266 395 aaKnown RBP8.26□□□□□ -1.09
NIPBL-202ENST00000448238 LAIR1Q6GTX8 287 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 OR2AK2Q8NG84 335 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 WDR76Q9H967 626 aa8.26□□□□□ -1.09
NIPBL-202ENST00000448238 KDM4EB2RXH2 506 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 PNRC1Q12796 327 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 Q499Y3 187 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 DCAF4L2Q8NA75 395 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 OR1L4Q8NGR5 311 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 CYB5D2Q8WUJ1 264 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 PACRGQ96M98 296 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 TAAR6Q96RI8 345 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 FOXD2O60548 495 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-202ENST00000448238 ZNF217O75362 1048 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 LYPLA2O95372 231 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 STATHP02808 62 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 FCGR2CP31995 323 aa8.25□□□□□ -1.09
NIPBL-202ENST00000448238 PTGIRP43119 386 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms