RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 KIR3DL3Q8N743 410 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 OR1K1Q8NGR3 316 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 KCTD7Q96MP8 289 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 GPR22Q99680 433 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 THAP7Q9BT49 309 aaPredicted RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 TMEM121Q9BTD3 319 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 YIPF3Q9GZM5 350 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ING2Q9H160 280 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 PPA2Q9H2U2 334 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 RALYQ9UKM9 306 aaKnown RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 AK6Q9Y3D8 172 aaKnown RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 MYOM2P54296 1465 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 YLPM1P49750 1951 aaKnown RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 P2RX6O15547 441 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 EIF3GO75821 320 aaKnown RBP eCLIP3.42□□□□□ -1.86
UBR3-206ENST00000444475 CNIH1O95406 144 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 RAB36O95755 333 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 VSIG8P0DPA2 414 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ALOX5APP20292 161 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ERVFRD-1P60508 538 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 DLG1Q12959 904 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 GRK1Q15835 563 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 MAPK14Q16539 360 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 GPR135Q8IZ08 494 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 OR13J1Q8NGT2 312 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 CASTOR1Q8WTX7 329 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ITCHQ96J02 903 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 DHX35Q9H5Z1 703 aaKnown RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 PANK3Q9H999 370 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 SIAEQ9HAT2 523 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 TPT1P8Q9HAU6 139 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 RETNQ9HD89 108 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ST6GALNAC2Q9UJ37 374 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 SLIT2O94813 1529 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 VIRMAQ69YN4 1812 aaKnown RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 KIAA1107Q9UPP5 1409 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 QSER1Q2KHR3 1735 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 A0A1B0GTH9 108 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 SH2D1BO14796 132 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 UBDO15205 165 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ZG16O60844 167 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 UGT2B17O75795 530 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 NEURL1O76050 574 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 HOXC4P09017 264 aaPredicted RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 RBP1P09455 135 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 TCP1P17987 556 aaKnown RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 FGF9P31371 208 aaPredicted RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 SLC35B1P78383 322 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 BAMBIQ13145 260 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 GPR17Q13304 367 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 FAM53BQ14153 422 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ATP6AP1Q15904 470 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 FRRS1Q6ZNA5 592 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 CBLL1Q75N03 491 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 OLIG3Q7RTU3 272 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 GRINAQ7Z429 371 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 FAM19A5Q7Z5A7 132 aaPredicted RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 GALNT10Q86SR1 603 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 MRPL52Q86TS9 123 aaKnown RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 ANGPTL5Q86XS5 388 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 CCDC71Q8IV32 467 aaPredicted RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 SFTPA2Q8IWL1 248 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 CPNE9Q8IYJ1 553 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 CMTM1Q8IZ96 169 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 SLC34A3Q8N130 599 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 MTURNQ8N3F0 131 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 OR11H4Q8NGC9 324 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ITFG1Q8TB96 612 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 C16orf78Q8WTQ4 265 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ABTB1Q969K4 478 aaPredicted RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 RERGQ96A58 199 aaPredicted RBP3.42□□□□□ -1.86
UBR3-206ENST00000444475 CLDN23Q96B33 292 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 TM4SF18Q96CE8 201 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 QKIQ96PU8 341 aaKnown RBP eCLIP3.42□□□□□ -1.867e-7■■■■■ 88.6
UBR3-206ENST00000444475 TIMP4Q99727 224 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 DCTN5Q9BTE1 182 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ARL6Q9H0F7 186 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 OR10A2Q9H208 303 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 POLD4Q9HCU8 107 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 MLXQ9UH92 298 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 ADAM29Q9UKF5 820 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 FZR1Q9UM11 496 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 AMDHD2Q9Y303 409 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 THSD7AQ9UPZ6 1657 aa3.42□□□□□ -1.86
UBR3-206ENST00000444475 FAM231BA6NCW3 169 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 OR6C6A6NF89 314 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 TRABD2BA6NFA1 517 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 KRT75O95678 551 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 TTC4O95801 387 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 AVPP01185 164 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 MT-ND4P03905 459 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 ELANEP08246 267 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 CYP2D6P10635 497 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 MGMTP16455 207 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 DCTP40126 519 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 TAS2R39P59534 338 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 RPS4XP62701 263 aaKnown RBP3.41□□□□□ -1.86
UBR3-206ENST00000444475 MAD2L1Q13257 205 aaPredicted RBP3.41□□□□□ -1.86
UBR3-206ENST00000444475 ZNF585BQ52M93 769 aa3.41□□□□□ -1.86
UBR3-206ENST00000444475 ZNF542PQ5EBM4 170 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms