RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SULT1C2O00338 296 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 ZP3P21754 424 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 HTR2CP28335 458 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 ZP2Q05996 745 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 BTN1A1Q13410 526 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 ZMYND11Q15326 602 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 ELAVL1Q15717 326 aaKnown RBP14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 RGS7BPQ6MZT1 257 aaPredicted RBP14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 GABRG1Q8N1C3 465 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 CCDC107Q8WV48 283 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 C1QTNF6Q9BXI9 259 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 REG4Q9BYZ8 158 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 ALX4Q9H161 411 aaPredicted RBP14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 TTYH1Q9H313 450 aaPredicted RBP14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 VSX1Q9NZR4 365 aaPredicted RBP14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 A0A1W2PQD3 144 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 CTLA4P16410 223 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 PLCXD2Q0VAA5 305 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 ETFDHQ16134 617 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 DCAF12L2Q5VW00 463 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 ZNF627Q7L945 461 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 GKN2Q86XP6 184 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 LMX1AQ8TE12 382 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 ASB13Q8WXK3 278 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 CXorf58Q96LI9 332 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 NKX3-1Q99801 234 aaPredicted RBP14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 NUDT9Q9BW91 350 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 CHST6Q9GZX3 395 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 SCPEP1Q9HB40 452 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 PFDN2Q9UHV9 154 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 MSRAQ9UJ68 235 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 KCNMB2Q9Y691 235 aa14.85□□□□□ -0.03
SEMA3B-207ENST00000441915 IGKV3D-11A0A0A0MRZ8 115 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 IGLV1-36A0A0B4J1U3 117 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 LPLP06858 475 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 MFGE8Q08431 387 aaPredicted RBP14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 EIF2B1Q14232 305 aaKnown RBP14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 GLYATL3Q5SZD4 288 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 C8orf44Q96CB5 159 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 ABHD6Q9BV23 337 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 MYO15AQ9UKN7 3530 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 RP1P56715 2156 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 TMED7-TICAM2A0A0A6YYA0 188 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 TSPAN2O60636 221 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 RAB3DO95716 219 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 PMS2P2O95744 297 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 ITGB2P05107 769 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 CALCRP30988 508 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 POLR2HP52434 150 aaKnown RBP14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 MAP2K6P52564 334 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 GLO1Q04760 184 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 GK2Q14410 553 aaPredicted RBP14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 TMEM205Q6UW68 189 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 C9orf40Q8IXQ3 194 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 ST8SIA4Q92187 359 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 SLC25A28Q96A46 364 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 SEH1LQ96EE3 360 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 SLC25A44Q96H78 314 aaPredicted RBP14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 POFUT1Q9H488 388 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 TMED7Q9Y3B3 224 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 LRP12Q9Y561 859 aa14.84□□□□□ -0.03
SEMA3B-207ENST00000441915 SLC22A23A1A5C7 686 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 POM121CA8CG34 1229 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 A8MVM7 634 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 DXOO77932 396 aaKnown RBP14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 MELTFP08582 738 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 C1orf140Q5VVS0 124 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 CATSPERDQ86XM0 798 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 FAM174AQ8TBP5 190 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 DAZLQ92904 295 aaKnown RBP14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 LINC00052Q96N35 136 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 ZNF587Q96SQ5 575 aaPredicted RBP14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 GAL3ST1Q99999 423 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 SLC25A21Q9BQT8 299 aaPredicted RBP14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 CHRNA10Q9GZZ6 450 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 PRMT8Q9NR22 394 aaPredicted RBP14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 TAS2R4Q9NYW5 299 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 A0A1W2PPC1 479 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 NPIPB7O75200 414 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 WISP1O95388 367 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 OR4E1P0C645 316 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 CRABP1P29762 137 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 NUP62P37198 522 aaPredicted RBP14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 TMEM229BQ8NBD8 167 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 OR6M1Q8NGM8 313 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 DUSP19Q8WTR2 217 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 ZDHHC12Q96GR4 267 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 DHCR7Q9UBM7 475 aaKnown RBP14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 COPS7AQ9UBW8 275 aa14.83□□□□□ -0.04
SEMA3B-207ENST00000441915 TMEM82A0PJX8 343 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 FSTP19883 344 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 SORDQ00796 357 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 NSDHLQ15738 373 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 Q6ZS52 159 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 MDGA2Q7Z553 956 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 ZNF454Q8N9F8 522 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 OR52N5Q8NH56 324 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 RLN3Q8WXF3 142 aa14.82□□□□□ -0.04
SEMA3B-207ENST00000441915 MVB12AQ96EY5 273 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms