RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ANOS1P23352 680 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CD27P26842 260 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 HTR2AP28223 471 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 HTR1FP30939 366 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ATP6V1E1P36543 226 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 SOX3P41225 446 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 MAP3K8P41279 467 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC1A3P43003 542 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 GPR4P46093 362 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC9A3P48764 834 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CAPZA1P52907 286 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PSMD4P55036 377 aaKnown RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CTBP2P56545 445 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 DEFA1P59665 94 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 DEFA3P59666 94 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 HNRNPKP61978 463 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PPP1CAP62136 330 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGLV3-21P80748 117 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ACSM1Q08AH1 577 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF155Q12901 538 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 BIKQ13323 160 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 EXOSC7Q15024 291 aaKnown RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ELOCQ15369 112 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 DEFB110Q30KQ9 67 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 AMZ1Q400G9 498 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPANXN2Q5MJ10 180 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 MRPL2Q5T653 305 aaKnown RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 AGAP7PQ5VUJ5 663 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 LIPKQ5VXJ0 399 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 NXNL2Q5VZ03 156 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF613Q6PF04 617 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PAPD4Q6PIY7 484 aaKnown RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 HSDL2Q6YN16 418 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF620Q6ZNG0 422 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 DGAT2L6Q6ZPD8 337 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 RTL4Q6ZR62 310 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMPRSS11FQ6ZWK6 438 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PRSS41Q7RTY9 318 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF550Q7Z398 422 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF329Q86UD4 541 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 LHFPL3Q86UP9 236 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 SNX29P2Q8IUI4 249 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 GID4Q8IVV7 300 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PHC2Q8IXK0 858 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 TDHQ8IZJ6 230 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 MAML2Q8IZL2 1156 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ARL14Q8N4G2 192 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR6C4Q8NGE1 309 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR52R1Q8NGF1 315 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR52L1Q8NGH7 329 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR9A4Q8NGU2 314 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR4Q3Q8NH05 313 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 LMX1AQ8TE12 382 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 TMEM239Q8WW34 195 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 UFD1Q92890 307 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 RIT1Q92963 219 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC35B4Q969S0 331 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ERGIC1Q969X5 290 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ABHD8Q96I13 439 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 KCTD7Q96MP8 289 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF578Q96N58 590 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 COQ7Q99807 217 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 SLC30A2Q9BRI3 323 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PELOQ9BRX2 385 aaKnown RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 MED18Q9BUE0 208 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 CCDC32Q9BV29 185 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 LRRC61Q9BV99 259 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 NPFFR1Q9GZQ6 430 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 OR52D1Q9H346 318 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 UBQLN3Q9H347 655 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 KCNK15Q9H427 330 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 FN3KQ9H479 309 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 UCK1Q9HA47 277 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 LMAN1LQ9HAT1 526 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 FOLH1BQ9HBA9 442 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 FAM60AQ9NP50 221 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 HINT3Q9NQE9 182 aaKnown RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PRTFDC1Q9NRG1 225 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 TXNL4BQ9NX01 149 aaKnown RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 OCIAD1Q9NX40 245 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 QPCTLQ9NXS2 382 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 RPS6KB2Q9UBS0 482 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF229Q9UJW7 825 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 ZNF223Q9UK11 482 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 PLCL2Q9UPR0 1127 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 BAIAP2Q9UQB8 552 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 TRAPPC4Q9Y296 219 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 GSTK1Q9Y2Q3 226 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 KCNK7Q9Y2U2 307 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 MED31Q9Y3C7 131 aa3.06□□□□□ -1.92
HMGB3P11-201ENST00000440127 MN1Q10571 1320 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 SAA2-SAA4A0A096LPE2 208 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGLV5-52A0A0A0MRZ9 124 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 NPIPA5A0A0B4J1W7 369 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGHV1OR15-9A0A0B4J2B8 117 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 A0A0B4J2E0 115 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 IQCMA0A1B0GVH7 501 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 A0A1B0GWA3 101 aa3.05□□□□□ -1.92
HMGB3P11-201ENST00000440127 A0A1B0GX12 115 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms