RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZMAT5Q9UDW3 170 aaKnown RBP8.2□□□□□ -1.1
COPB1-202ENST00000439561 LHX6Q9UPM6 363 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 TMED7Q9Y3B3 224 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 PRSS38A1L453 326 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 TTLL8A6PVC2 850 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 HRH1P35367 487 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 B2MP61769 119 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 C1orf61Q13536 156 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 PABPC1L2AQ5JQF8 200 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 KCTD18Q6PI47 426 aaPredicted RBP8.2□□□□□ -1.1
COPB1-202ENST00000439561 UNQ9370/PRO34162Q6UXP9 181 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 DGAT2L6Q6ZPD8 337 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 SLC29A4Q7RTT9 530 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 FJX1Q86VR8 437 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 BAP18Q8IXM2 172 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 OR51A2Q8NGJ7 313 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 ZNF587Q96SQ5 575 aaPredicted RBP8.2□□□□□ -1.1
COPB1-202ENST00000439561 AMELYQ99218 206 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 EIF5A2Q9GZV4 153 aaKnown RBP8.2□□□□□ -1.1
COPB1-202ENST00000439561 PRTFDC1Q9NRG1 225 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 DZANK1Q9NVP4 752 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 ANKRD10Q9NXR5 420 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 SERTAD3Q9UJW9 196 aa8.2□□□□□ -1.1
COPB1-202ENST00000439561 OR6C65A6NJZ3 312 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 OR4C45A6NMZ5 311 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 ZNF254O75437 659 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 APODP05090 189 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 MAOAP21397 527 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 PSMB6P28072 239 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 TACR3P29371 465 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 DRD3P35462 400 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 ACAA2P42765 397 aaKnown RBP8.19□□□□□ -1.1
COPB1-202ENST00000439561 OR2B8PP59922 312 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
COPB1-202ENST00000439561 IL10RAQ13651 578 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 MPPED2Q15777 294 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 SLC22A6Q4U2R8 563 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 ZNF425Q6IV72 752 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 JMJD6Q6NYC1 403 aaPredicted RBP8.19□□□□□ -1.1
COPB1-202ENST00000439561 FRMD1Q8N878 549 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 MRPL43Q8N983 215 aaKnown RBP8.19□□□□□ -1.1
COPB1-202ENST00000439561 ZNF248Q8NDW4 579 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 MARCH1Q8TCQ1 289 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 RXFP4Q8TDU9 374 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 RSPRY1Q96DX4 576 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 MMABQ96EY8 250 aaPredicted RBP8.19□□□□□ -1.1
COPB1-202ENST00000439561 WBP1Q96G27 269 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 C5orf34Q96MH7 638 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 SULT4A1Q9BR01 284 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 RGCCQ9H4X1 137 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 SFXN1Q9H9B4 322 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 B9D1Q9UPM9 204 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 A0A087WUJ7 227 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 CXorf51AA0A1B0GTR3 108 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 SLC17A2O00624 439 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 MPIG6BO95866 241 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 FABP1P07148 127 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 SDHAP31040 664 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 BTG2P78543 158 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 NR0B2Q15466 257 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 PRICKLE4Q2TBC4 344 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 ADAM5Q6NVV9 412 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 TMPRSS9Q7Z410 1059 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 NAA40Q86UY6 237 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 CLEC1AQ8NC01 280 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 OR10H5Q8NGA6 315 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 SEH1LQ96EE3 360 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 TEX101Q9BY14 249 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 ZCCHC4Q9H5U6 513 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 CTSFQ9UBX1 484 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 TNFSF18Q9UNG2 199 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 DTX4Q9Y2E6 619 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 ANAPC1Q9H1A4 1944 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 P2RY10O00398 339 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 IGKV1D-16P01601 117 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 CTSEP14091 401 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 GNB3P16520 340 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 PSG6Q00889 435 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 INPP5JQ15735 1006 aaPredicted RBP8.19□□□□□ -1.1
COPB1-202ENST00000439561 HFEQ30201 348 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 DEFB115Q30KQ5 88 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 FAM78AQ5JUQ0 283 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 AGBL4Q5VU57 503 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 CBLN3Q6UW01 205 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 ANKRD33Q7Z3H0 272 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 ETFBKMTQ8IXQ9 262 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 CRIPAKQ8N1N5 446 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 OR1E3Q8WZA6 343 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 KTI12Q96EK9 354 aaPredicted RBP8.19□□□□□ -1.1
COPB1-202ENST00000439561 C4orf45Q96LM5 186 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 OR2A5Q96R48 311 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 LPAR4Q99677 370 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 HDAC8Q9BY41 377 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 NRSN2Q9GZP1 204 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 MAFFQ9ULX9 164 aa8.19□□□□□ -1.1
COPB1-202ENST00000439561 HTTP42858 3142 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 SSX5O60225 188 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 UPK3AO75631 287 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 ACTL6AO96019 429 aa8.18□□□□□ -1.1
COPB1-202ENST00000439561 IGFALSP35858 605 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms