RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 ACTBP60709 375 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 RPL27P61353 136 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 ACTG1P63261 375 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 LYSMD4Q5XG99 296 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 OTPQ5XKR4 325 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 TMEM225Q6GV28 225 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 ALKAL2Q6UX46 152 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 OVCH2Q7RTZ1 564 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC51BQ86UW2 128 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 WDR5BQ86VZ2 330 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 TMEM151BQ8IW70 566 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 MAML2Q8IZL2 1156 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 GABRG1Q8N1C3 465 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 TNFAIP8L1Q8WVP5 186 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 C8orf44Q96CB5 159 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 EXO5Q9H790 373 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 VSX1Q9NZR4 365 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 CPAMD8Q8IZJ3 1885 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 COL5A1P20908 1838 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 A8MUA0 341 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 TMEM150CB9EJG8 249 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 BET1O15155 118 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 PIAS2O75928 621 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 DDAH2O95865 285 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 MT-ATP6P00846 226 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 CD37P11049 281 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 FSTP19883 344 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 CENPAP49450 140 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 INSM1Q01101 510 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 MFGE8Q08431 387 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 GK2Q14410 553 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 ACKR1Q16570 336 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 GSG1LQ6UXU4 331 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 C1orf210Q8IVY1 113 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 OR1J4Q8NGS1 313 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 COQ8AQ8NI60 647 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 ZNF721Q8TF20 911 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 DVL3Q92997 716 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 TSLPQ969D9 159 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 ATG5Q9H1Y0 275 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 UCK1Q9HA47 277 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 SOHLH2Q9NX45 425 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 DHDHQ9UQ10 334 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 SESN1Q9Y6P5 492 aa14.74□□□□□ -0.05
CLCNKA-203ENST00000439316 IGKV3D-11A0A0A0MRZ8 115 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 A0A1W2PQD3 144 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 LILRA5A6NI73 299 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 C17orf51A8MQB3 221 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 A8MXK9 166 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 H3BUI4 141 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 GMFGO60234 142 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 EIF4E2O60573 245 aaKnown RBP14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 AQP8O94778 261 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 PLGP00747 810 aaPredicted RBP14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 SPARCP09486 303 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 RPA2P15927 270 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 IGFBP3P17936 291 aaPredicted RBP14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 NUP62P37198 522 aaPredicted RBP14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 TAS2R19P59542 299 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 ARHGAP40Q5TG30 622 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 PMS2CLQ68D20 193 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 POMZP3Q6PJE2 187 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 NDUFAF7Q7L592 441 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 CATSPERDQ86XM0 798 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 TMEM229BQ8NBD8 167 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 PLPP7Q8NBV4 271 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 ASB5Q8WWX0 329 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 DNAJA3Q96EY1 480 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 FOXN4Q96NZ1 517 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 CHST6Q9GZX3 395 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 TMEM138Q9NPI0 162 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 TNRC6BQ9UPQ9 1833 aaKnown RBP14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 UNC13CQ8NB66 2214 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 IGHV5-51A0A0C4DH38 117 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 SLC16A7O60669 478 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 RAD1O60671 282 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 WISP1O95388 367 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 LPLP06858 475 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 GFERP55789 205 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 GMFBP60983 142 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 C4orf46Q504U0 113 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 PXDC1Q5TGL8 231 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 GLT8D1Q68CQ7 371 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 MARCH3Q86UD3 253 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 CDH26Q8IXH8 852 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 OR8S1Q8NH09 359 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 PPP1R14AQ96A00 147 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 SEH1LQ96EE3 360 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 GAL3ST4Q96RP7 486 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 TXNIPQ9H3M7 391 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 SCPEP1Q9HB40 452 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 UPB1Q9UBR1 384 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 PFDN2Q9UHV9 154 aa14.73□□□□□ -0.05
CLCNKA-203ENST00000439316 POM121CA8CG34 1229 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 ALG1L2C9J202 215 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 TSPAN2O60636 221 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 NPIPB7O75200 414 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 OR6A2O95222 327 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 PMS2P2O95744 297 aa14.72□□□□□ -0.05
CLCNKA-203ENST00000439316 IGHMP01871 453 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms