RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 ZNF584Q8IVC4 421 aa13.32□□□□□ -0.28
DDX56-205ENST00000433257 OR5T3Q8NGG3 340 aa13.32□□□□□ -0.28
DDX56-205ENST00000433257 ZBTB8AQ96BR9 441 aa13.32□□□□□ -0.28
DDX56-205ENST00000433257 SLC41A2Q96JW4 573 aa13.32□□□□□ -0.28
DDX56-205ENST00000433257 VRK1Q99986 396 aaPredicted RBP13.32□□□□□ -0.28
DDX56-205ENST00000433257 OR10A5Q9H207 317 aa13.32□□□□□ -0.28
DDX56-205ENST00000433257 CCDC86Q9H6F5 360 aaKnown RBP13.32□□□□□ -0.28
DDX56-205ENST00000433257 TMEM185BQ9H7F4 350 aa13.32□□□□□ -0.28
DDX56-205ENST00000433257 NOP16Q9Y3C1 178 aaKnown RBP13.32□□□□□ -0.28
DDX56-205ENST00000433257 A0A1W2PQF6 199 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 TCRBV21S2A2A0A5A6 115 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 RNF222A6NCQ9 220 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 PSMD9O00233 223 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 SLC31A1O15431 190 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 ZNF264O43296 627 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 FOXS1O43638 330 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 OR6A2O95222 327 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 EML2O95834 649 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 IL2RAP01589 272 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 ITGA5P08648 1049 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 CT45A8P0DMV1 189 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 CT45A9P0DMV2 189 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 CCKBRP32239 447 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 DLSTP36957 453 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 KIR3DL2P43630 455 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 RIDAP52758 137 aaKnown RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 EIF5AP63241 154 aaKnown RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 RPL18Q07020 188 aaKnown RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 SCRN3Q0VDG4 424 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 FAM53BQ14153 422 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 PNLIPRP3Q17RR3 467 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 CT45A2Q5DJT8 189 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 MESTQ5EB52 335 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 TMEM225Q6GV28 225 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 PRSS41Q7RTY9 318 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 MAMDC2Q7Z304 686 aaPredicted RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 DPY19L4Q7Z388 723 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 PRSS35Q8N3Z0 413 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 BPIFB2Q8N4F0 458 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 TSPAN32Q96QS1 320 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 LAT2Q9GZY6 243 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 SEMA6CQ9H3T2 930 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 PRMT8Q9NR22 394 aaPredicted RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 TMEM74BQ9NUR3 256 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 RAD1O60671 282 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 AKR7A3O95154 331 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 IL33O95760 270 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 TPT1P13693 172 aaKnown RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 IGFBP3P17936 291 aaPredicted RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 ACHEP22303 614 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 HNRNPA2B1P22626 353 aaKnown RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 HOXA6P31267 233 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 PRKXP51817 358 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 ADAM8P78325 824 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 OC90Q02509 493 aaPredicted RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 DHRS2Q13268 280 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 SKP2Q13309 424 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 ELOCQ15369 112 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 ZNF528Q3MIS6 628 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 C1orf100Q5SVJ3 147 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 ATPAF1Q5TC12 328 aaPredicted RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 STPG1Q5TH74 334 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 ZNF704Q6ZNC4 412 aaPredicted RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 RAB11FIP2Q7L804 512 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 MAML2Q8IZL2 1156 aaPredicted RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 OR4N2Q8NGD1 307 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 OR4D10Q8NGI6 311 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 SLC25A28Q96A46 364 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 LPAR4Q99677 370 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 ZNF471Q9BX82 626 aaPredicted RBP13.31□□□□□ -0.28
DDX56-205ENST00000433257 ELOVL3Q9HB03 270 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 HRASLS2Q9NWW9 162 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 LRIT1Q9P2V4 623 aa13.31□□□□□ -0.28
DDX56-205ENST00000433257 TRAV36DV7A0A075B6V5 113 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 FAM171A2A8MVW0 826 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 K7ESF4 209 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 HLA-AP01891 365 aaKnown RBP13.3□□□□□ -0.28
DDX56-205ENST00000433257 ISG15P05161 165 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 COL9A1P20849 921 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 MAGEB1P43366 347 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 ARRB1P49407 418 aaPredicted RBP13.3□□□□□ -0.28
DDX56-205ENST00000433257 PPIAP62937 165 aaKnown RBP13.3□□□□□ -0.28
DDX56-205ENST00000433257 GUCA2AQ02747 115 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 DMWDQ09019 674 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 RNASE10Q5GAN6 216 aaKnown RBP13.3□□□□□ -0.28
DDX56-205ENST00000433257 PRAMEF17Q5VTA0 474 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 AWAT2Q6E213 333 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 PAPD4Q6PIY7 484 aaKnown RBP13.3□□□□□ -0.28
DDX56-205ENST00000433257 DEGS2Q6QHC5 323 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 ZNF627Q7L945 461 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 OR2W3Q7Z3T1 314 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 AVL9Q8NBF6 648 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 TMEM185AQ8NFB2 350 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 BPIFCQ8NFQ6 507 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 OR8S1Q8NH09 359 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 DOK4Q8TEW6 326 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 MITD1Q8WV92 249 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 ATOH1Q92858 354 aaPredicted RBP13.3□□□□□ -0.28
DDX56-205ENST00000433257 ARL11Q969Q4 196 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 PMEPA1Q969W9 287 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms