RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 L3MBTL4Q8NA19 623 aa13.28□□□□□ -0.28
PTPN13-203ENST00000427191 PRAMEF25A6NGN4 478 aa13.27□□□□□ -0.28
PTPN13-203ENST00000427191 IGFBP1P08833 259 aaPredicted RBP13.27□□□□□ -0.28
PTPN13-203ENST00000427191 EPHA5P54756 1037 aa13.27□□□□□ -0.28
PTPN13-203ENST00000427191 PRAMEF5Q5TYX0 476 aa13.27□□□□□ -0.28
PTPN13-203ENST00000427191 PRAMEF6Q5VXH4 476 aa13.27□□□□□ -0.28
PTPN13-203ENST00000427191 LRRC3CA6NJW4 275 aa13.27□□□□□ -0.28
PTPN13-203ENST00000427191 H0YGG7 62 aa13.27□□□□□ -0.28
PTPN13-203ENST00000427191 TPOP07202 933 aa13.27□□□□□ -0.28
PTPN13-203ENST00000427191 EN2P19622 333 aaPredicted RBP13.27□□□□□ -0.28
PTPN13-203ENST00000427191 GP2P55259 537 aaKnown RBP13.27□□□□□ -0.28
PTPN13-203ENST00000427191 ANKRD16Q6P6B7 361 aa13.27□□□□□ -0.28
PTPN13-203ENST00000427191 MRPS2Q9Y399 296 aaKnown RBP13.27□□□□□ -0.28
PTPN13-203ENST00000427191 USF1P22415 310 aaPredicted RBP13.27□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF542PQ5EBM4 170 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 ABI3BPQ7Z7G0 1075 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 ANKRD53Q8N9V6 530 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 SLC38A9Q8NBW4 561 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 FBXO27Q8NI29 283 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 MRPL38Q96DV4 380 aaKnown RBP13.27□□□□□ -0.29
PTPN13-203ENST00000427191 IGKV6-21A0A0C4DH24 114 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 TLCD2A6NGC4 264 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 SHHQ15465 462 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 TOR2AQ5JU69 321 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 ARHGDIGQ99819 225 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 HDAC8Q9BY41 377 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 TCN2P20062 427 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF718Q3SXZ3 478 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 MAML2Q8IZL2 1156 aaPredicted RBP13.27□□□□□ -0.29
PTPN13-203ENST00000427191 C11orf40Q8WZ69 217 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF845Q96IR2 970 aaPredicted RBP13.27□□□□□ -0.29
PTPN13-203ENST00000427191 KLF16Q9BXK1 252 aaPredicted RBP13.27□□□□□ -0.29
PTPN13-203ENST00000427191 SNX11Q9Y5W9 270 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 DBX1A6NMT0 343 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 HSPB6O14558 160 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 SCGB1C2P0DMR2 95 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 TMEM183BQ1AE95 376 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 MOGAT2Q3SYC2 334 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 FBXO46Q6PJ61 603 aaPredicted RBP13.27□□□□□ -0.29
PTPN13-203ENST00000427191 PNPLA1Q8N8W4 532 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 MDGA1Q8NFP4 955 aa13.27□□□□□ -0.29
PTPN13-203ENST00000427191 OR2M5A3KFT3 312 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 ARPC3O15145 178 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 NOVA1P51513 510 aaKnown RBP13.26□□□□□ -0.29
PTPN13-203ENST00000427191 SYPL1Q16563 259 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 LSRQ86X29 649 aaPredicted RBP13.26□□□□□ -0.29
PTPN13-203ENST00000427191 A0A1B0GTW7 788 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 CCKARP32238 428 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 PHLDA2Q53GA4 152 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 TMEM174Q8WUU8 243 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 AKR1E2Q96JD6 320 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 GFRA2O00451 464 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 OR5H8P0DN80 308 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 SULT1A2P50226 295 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 EDDM3BP56851 147 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 CDC20Q12834 499 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 TMEM64Q6YI46 380 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 Q6ZNX1 250 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 OR1J1Q8NGS3 322 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 DYNC2LI1Q8TCX1 351 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 CSF3RQ99062 836 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 WWTR1Q9GZV5 400 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 LRIT1Q9P2V4 623 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 AGFG1P52594 562 aaKnown RBP13.26□□□□□ -0.29
PTPN13-203ENST00000427191 PPP1CBP62140 327 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 HSD11B1LQ7Z5J1 315 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 SMIM7Q9BQ49 75 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 FLVCR1Q9Y5Y0 555 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 ELLP55199 621 aaPredicted RBP13.26□□□□□ -0.29
PTPN13-203ENST00000427191 ZP2Q05996 745 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 GABARAPL1Q9H0R8 117 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 ATXN1LP0C7T5 689 aaKnown RBP13.26□□□□□ -0.29
PTPN13-203ENST00000427191 OR8G1Q15617 311 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 MED25Q71SY5 747 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 GDF7Q7Z4P5 450 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 ANGPTL5Q86XS5 388 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 PHOSPHO2Q8TCD6 241 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 OR52A4PA6NMU1 304 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 NID1P14543 1247 aa13.26□□□□□ -0.29
PTPN13-203ENST00000427191 CNN1P51911 297 aaKnown RBP13.26□□□□□ -0.29
PTPN13-203ENST00000427191 GOT1L1Q8NHS2 421 aaPredicted RBP13.26□□□□□ -0.29
PTPN13-203ENST00000427191 PMS2P1A4D2B8 440 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF207O43670 478 aaKnown RBP13.25□□□□□ -0.29
PTPN13-203ENST00000427191 RTP2Q5QGT7 225 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 NCR3LG1Q68D85 454 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 CMTM3Q96MX0 182 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 IKZF5Q9H5V7 419 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 LIMS3P0CW19 117 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 LIMS4P0CW20 117 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 MAOBP27338 520 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF154Q13106 437 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF813Q6ZN06 617 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 OR51S1Q8NGJ8 323 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 TOE1Q96GM8 510 aaKnown RBP13.25□□□□□ -0.29
PTPN13-203ENST00000427191 XRCC2O43543 280 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 SIX6O95475 246 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 PNLIPRP3Q17RR3 467 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF787Q6DD87 383 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 NANOGP1Q8N7R0 232 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 CDCA4Q9BXL8 241 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms