RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 OR2AT4A6NND4 320 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 SEC14L6B5MCN3 397 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 E7EQ34 232 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 MFNGO00587 321 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 PRYO14603 147 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 GOSR2O14653 212 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 PCDH7O60245 1069 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 UGDHO60701 494 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 NME6O75414 186 aaPredicted RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 STK16O75716 305 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 JTBO76095 146 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 AKR7A3O95154 331 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 IGF2P01344 180 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TRBC1P01850 177 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 SERPINA5P05154 406 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 HOXB5P09067 269 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 HNRNPA1P09651 372 aaKnown RBP eCLIP4.91□□□□□ -1.62
CLK1-202ENST00000409403 RAB40ALP0C0E4 278 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 OR8U8P0C7N1 319 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 LINC00614P0C842 121 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 LIMS3P0CW19 117 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 LIMS4P0CW20 117 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TPT1P13693 172 aaKnown RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 ADCYAP1P18509 176 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TNFRSF1AP19438 455 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TACR2P21452 398 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 S1PR1P21453 382 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 AQP1P29972 269 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 RAD52P43351 418 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 MAGEB1P43366 347 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 NPBWR1P48145 328 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 LHX1P48742 406 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TAF6P49848 677 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 LUMP51884 338 aaPredicted RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 SLC37A1P57057 533 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 BPIFB3P59826 476 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 KRTAP10-2P60368 255 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 RAB8AP61006 207 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 CDK5Q00535 292 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 BCL2L1Q07817 233 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 ELAVL2Q12926 359 aaKnown RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 GINS1Q14691 196 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 FBXO48Q5FWF7 155 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 RAB41Q5JT25 222 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 SLC35D3Q5M8T2 416 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 EOGTQ5NDL2 527 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 PLPP4Q5VZY2 271 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 OR10K2Q6IF99 312 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 ZNF322Q6U7Q0 402 aaPredicted RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 SBSNQ6UWP8 590 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 DRAM2Q6UX65 266 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 SERPINA13PQ6UXR4 307 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 CERS6Q6ZMG9 384 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 ACOT7LQ6ZUV0 252 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 LINGO2Q7L985 606 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 SSX6Q7RTT6 188 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 PLPPR4Q7Z2D5 763 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TMPRSS11BQ86T26 416 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 MRPL52Q86TS9 123 aaKnown RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 UMODL1-AS1Q8N2C9 162 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 ARRDC1Q8N5I2 433 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 ZNF383Q8NA42 475 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 OR4K2Q8NGD2 314 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 OR1S2Q8NGQ3 325 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 OR4Q3Q8NH05 313 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 OR51Q1Q8NH59 317 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 OR5R1Q8NH85 324 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 GOT1L1Q8NHS2 421 aaPredicted RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 ZNF461Q8TAF7 563 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 RAB40AQ8WXH6 277 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 CDCA3Q99618 268 aaPredicted RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 NRIP2Q9BQI9 281 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 WRAP53Q9BUR4 548 aaKnown RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 PINK1Q9BXM7 581 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 MRPL37Q9BZE1 423 aaKnown RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 SYNPO2LQ9H987 977 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TMEM248Q9NWD8 314 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 TAS2R10Q9NYW0 307 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 RCC2Q9P258 522 aaKnown RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 DHCR7Q9UBM7 475 aaKnown RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 IL17BQ9UHF5 180 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 EXOGQ9Y2C4 368 aaKnown RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 SIRT4Q9Y6E7 314 aaPredicted RBP4.91□□□□□ -1.62
CLK1-202ENST00000409403 MGAQ8IWI9 3026 aa4.91□□□□□ -1.62
CLK1-202ENST00000409403 RNF222A6NCQ9 220 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ACOD1A6NK06 481 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 SHISA7A6NL88 538 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 BCAT2O15382 392 aaPredicted RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 FLRT2O43155 660 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 GMFGO60234 142 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 GATBO75879 557 aaKnown RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 SOX14O95416 240 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 APBB3O95704 486 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 RAB3DO95716 219 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 PDYNP01213 254 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 CD8AP01732 235 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 ANXA5P08758 320 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 CHRM5P08912 532 aaPredicted RBP4.9□□□□□ -1.62
CLK1-202ENST00000409403 NQO2P16083 231 aa4.9□□□□□ -1.62
CLK1-202ENST00000409403 WT1P19544 449 aaPredicted RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms